Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Add arc plugin to @jbrowse/react-linear-genome-view core plugins #4067

Merged
merged 1 commit into from
Nov 20, 2023

Conversation

cmdcolin
Copy link
Collaborator

Currently the lgv storybook actually crashes because the volvox config added a sample track that is a LinearPairedArcDisplay, which is supplied by plugin-arc, which works in jbrowse-web but not in the @jbrowse/react-linear-genome-view because plugin-arc is not added to the react-linear-genome-view

We could filter this out but IMO its probably just better to add this arc plugin to the lgv. It has useful variant viewing characteristics for SVs which embedded can use

@github-actions github-actions bot added the needs label triage Needs a label to show in changelog (breaking, enhancement, bug, documentation, or internal) label Nov 20, 2023
@cmdcolin
Copy link
Collaborator Author

Copy link

codecov bot commented Nov 20, 2023

Codecov Report

All modified and coverable lines are covered by tests ✅

Comparison is base (5f762ea) 63.19% compared to head (091fc5f) 63.19%.

Additional details and impacted files
@@           Coverage Diff           @@
##             main    #4067   +/-   ##
=======================================
  Coverage   63.19%   63.19%           
=======================================
  Files        1044     1044           
  Lines       30551    30551           
  Branches     7289     7289           
=======================================
  Hits        19307    19307           
  Misses      11073    11073           
  Partials      171      171           

☔ View full report in Codecov by Sentry.
📢 Have feedback on the report? Share it here.

@cmdcolin cmdcolin added enhancement New feature or request and removed needs label triage Needs a label to show in changelog (breaking, enhancement, bug, documentation, or internal) labels Nov 20, 2023
@cmdcolin cmdcolin merged commit c9b7241 into main Nov 20, 2023
11 checks passed
@cmdcolin cmdcolin changed the title Add arc plugin to lgv product Add arc plugin to @jbrowse/react-linear-genome-view core plugins Nov 20, 2023
@cmdcolin cmdcolin deleted the add_arc_plugin_to_lgvproduct branch November 20, 2023 22:08
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
enhancement New feature or request
Projects
None yet
Development

Successfully merging this pull request may close these issues.

1 participant