Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Some softclipping not rendered with "show soft clipping" on? #1562

Closed
cmdcolin opened this issue Dec 15, 2020 · 2 comments
Closed

Some softclipping not rendered with "show soft clipping" on? #1562

cmdcolin opened this issue Dec 15, 2020 · 2 comments
Labels
bug Something isn't working

Comments

@cmdcolin
Copy link
Collaborator

localhost_3000__config=test_data_config_demo json

I observed that some reads that I expected to have soft clipping rendered did not seem to be

The feature details shows ~3000 bases of soft clipping but there is nothing drawn to the left of this feature

Haven't deeply verified this yet but might be worth checking into

@cmdcolin cmdcolin added the bug Something isn't working label Dec 15, 2020
@cmdcolin
Copy link
Collaborator Author

Same screen without show soft clipping on

localhost_3000__config=test_data_config_demo json (2)

@cmdcolin
Copy link
Collaborator Author

this is technically due to secondary reads not having the seq to display

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
bug Something isn't working
Projects
None yet
Development

No branches or pull requests

1 participant