Publish

- @jbrowse/core@0.0.1-beta.23 - @jbrowse/development-tools@0.0.1-beta.28 - @jbrowse/plugin-alignments@0.0.1-beta.19 - @jbrowse/plugin-bed@0.0.1-beta.13 - @jbrowse/plugin-breakpoint-split-view@0.0.1-beta.15 - @jbrowse/plugin-circular-view@0.0.1-beta.15 - @jbrowse/plugin-config@0.0.1-beta.15 - @jbrowse/plugin-data-management@0.0.1-beta.15 - @jbrowse/plugin-dotplot-view@0.0.1-beta.15 - @jbrowse/plugin-filtering@0.0.1-beta.13 - @jbrowse/plugin-gff3@0.0.1-beta.15 - @jbrowse/plugin-hic@0.0.1-beta.13 - @jbrowse/plugin-legacy-jbrowse@0.0.1-beta.13 - @jbrowse/plugin-linear-comparative-view@0.0.1-beta.15 - @jbrowse/plugin-linear-genome-view@0.0.1-beta.16 - @jbrowse/plugin-lollipop@0.0.1-beta.13 - @jbrowse/plugin-menus@0.0.1-beta.14 - @jbrowse/plugin-protein@0.0.1-beta.13 - @jbrowse/plugin-rdf@0.0.1-beta.13 - @jbrowse/plugin-sequence@0.0.1-beta.14 - @jbrowse/plugin-spreadsheet-view@0.0.1-beta.19 - @jbrowse/plugin-sv-inspector@0.0.1-beta.14 - @jbrowse/plugin-svg@0.0.1-beta.14 - @jbrowse/plugin-trackhub-registry@0.0.1-beta.13 - @jbrowse/plugin-variants@0.0.1-beta.19 - @jbrowse/plugin-wiggle@0.0.1-beta.14 - @jbrowse/cli@0.0.1-beta.24 - @jbrowse/desktop@0.0.1-beta.25 - @jbrowse/protein-widget@0.0.1-beta.21 - @jbrowse/web@0.0.1-beta.26 - @jbrowse/website@0.0.1-beta.16
GMOD · Oct 13, 2020 · e224947 · e224947
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diff --git a/packages/core/CHANGELOG.md b/packages/core/CHANGELOG.md
@@ -1,3 +1,12 @@
+## [0.0.1-beta.23](https://github.com/GMOD/jbrowse-components/compare/v0.0.1-beta.11...v0.0.1-beta.23) (2020-10-13)
+
+### Reverts
+
+- Revert "Bump @docusaurus alpha version" ([32b604a](https://github.com/GMOD/jbrowse-components/commit/32b604a1ef829f2d2e17fa3822184577ea951e69))
+- Revert "Remove checkLocation from CLI base class" ([d399135](https://github.com/GMOD/jbrowse-components/commit/d399135e364d3553130c919bdfccbf17e14d6a9b))
+- Revert "Allow touchscreen using pointer events (#1112)" the pointer ([404546e](https://github.com/GMOD/jbrowse-components/commit/404546e5a1c71510a90a777957d32cd2c8f71ed1)), closes [#1112](https://github.com/GMOD/jbrowse-components/issues/1112)
+- Revert "Simplify command unzip (#1075)" ([9c0b975](https://github.com/GMOD/jbrowse-components/commit/9c0b97504b7a423a9c356ac3ffffc2754224c65a)), closes [#1075](https://github.com/GMOD/jbrowse-components/issues/1075)
+
 ## [0.0.1-beta.22](https://github.com/GMOD/jbrowse-components/compare/v0.0.1-beta.14...v0.0.1-beta.22) (2020-09-13)
 
 ### Reverts

diff --git a/packages/core/package.json b/packages/core/package.json
@@ -1,6 +1,6 @@
 {
   "name": "@jbrowse/core",
-  "version": "0.0.1-beta.22",
+  "version": "0.0.1-beta.23",
   "description": "JBrowse 2 core libraries used by plugins",
   "keywords": [
     "jbrowse",

diff --git a/packages/development-tools/CHANGELOG.md b/packages/development-tools/CHANGELOG.md
@@ -1,3 +1,12 @@
+## [0.0.1-beta.28](https://github.com/GMOD/jbrowse-components/compare/v0.0.1-beta.11...v0.0.1-beta.28) (2020-10-13)
+
+### Reverts
+
+- Revert "Bump @docusaurus alpha version" ([32b604a](https://github.com/GMOD/jbrowse-components/commit/32b604a1ef829f2d2e17fa3822184577ea951e69))
+- Revert "Remove checkLocation from CLI base class" ([d399135](https://github.com/GMOD/jbrowse-components/commit/d399135e364d3553130c919bdfccbf17e14d6a9b))
+- Revert "Allow touchscreen using pointer events (#1112)" the pointer ([404546e](https://github.com/GMOD/jbrowse-components/commit/404546e5a1c71510a90a777957d32cd2c8f71ed1)), closes [#1112](https://github.com/GMOD/jbrowse-components/issues/1112)
+- Revert "Simplify command unzip (#1075)" ([9c0b975](https://github.com/GMOD/jbrowse-components/commit/9c0b97504b7a423a9c356ac3ffffc2754224c65a)), closes [#1075](https://github.com/GMOD/jbrowse-components/issues/1075)
+
 ## [0.0.1-beta.27](https://github.com/GMOD/jbrowse-components/compare/v0.0.1-beta.14...v0.0.1-beta.27) (2020-09-13)
 
 ### Reverts

diff --git a/packages/development-tools/package.json b/packages/development-tools/package.json
@@ -1,6 +1,6 @@
 {
   "name": "@jbrowse/development-tools",
-  "version": "0.0.1-beta.27",
+  "version": "0.0.1-beta.28",
   "description": "Tools to help with developing and building JBrowse 2 plugins",
   "keywords": [
     "jbrowse",
@@ -31,7 +31,7 @@
     "postpublish": "git push origin master --follow-tags"
   },
   "dependencies": {
-    "@jbrowse/core": "^0.0.1-beta.22",
+    "@jbrowse/core": "^0.0.1-beta.23",
     "@types/copy-webpack-plugin": "^6.0.0",
     "@types/webpack": "^4.41.18",
     "change-case": "^4.1.1",

diff --git a/plugins/alignments/package.json b/plugins/alignments/package.json
@@ -1,6 +1,6 @@
 {
   "name": "@jbrowse/plugin-alignments",
-  "version": "0.0.1-beta.18",
+  "version": "0.0.1-beta.19",
   "description": "JBrowse 2 alignments adapters, tracks, etc.",
   "keywords": [
     "jbrowse",

diff --git a/plugins/bed/package.json b/plugins/bed/package.json
@@ -1,6 +1,6 @@
 {
   "name": "@jbrowse/plugin-bed",
-  "version": "0.0.1-beta.12",
+  "version": "0.0.1-beta.13",
   "description": "JBrowse 2 bed adapters, tracks, etc.",
   "keywords": [
     "jbrowse",

diff --git a/plugins/breakpoint-split-view/package.json b/plugins/breakpoint-split-view/package.json
@@ -1,6 +1,6 @@
 {
   "name": "@jbrowse/plugin-breakpoint-split-view",
-  "version": "0.0.1-beta.14",
+  "version": "0.0.1-beta.15",
   "description": "JBrowse 2 breakpoint detail split view",
   "keywords": [
     "jbrowse",

diff --git a/plugins/circular-view/package.json b/plugins/circular-view/package.json
@@ -1,6 +1,6 @@
 {
   "name": "@jbrowse/plugin-circular-view",
-  "version": "0.0.1-beta.14",
+  "version": "0.0.1-beta.15",
   "description": "JBrowse 2 circular view",
   "keywords": [
     "jbrowse",

diff --git a/plugins/config/package.json b/plugins/config/package.json
@@ -1,6 +1,6 @@
 {
   "name": "@jbrowse/plugin-config",
-  "version": "0.0.1-beta.14",
+  "version": "0.0.1-beta.15",
   "description": "JBrowse 2 config utilities",
   "keywords": [
     "jbrowse",

diff --git a/plugins/data-management/package.json b/plugins/data-management/package.json
@@ -1,6 +1,6 @@
 {
   "name": "@jbrowse/plugin-data-management",
-  "version": "0.0.1-beta.14",
+  "version": "0.0.1-beta.15",
   "description": "JBrowse 2 linear genome view",
   "keywords": [
     "jbrowse",

diff --git a/plugins/dotplot-view/package.json b/plugins/dotplot-view/package.json
@@ -1,6 +1,6 @@
 {
   "name": "@jbrowse/plugin-dotplot-view",
-  "version": "0.0.1-beta.14",
+  "version": "0.0.1-beta.15",
   "description": "JBrowse 2 dotplot view",
   "keywords": [
     "jbrowse",

diff --git a/plugins/filtering/package.json b/plugins/filtering/package.json
@@ -1,6 +1,6 @@
 {
   "name": "@jbrowse/plugin-filtering",
-  "version": "0.0.1-beta.12",
+  "version": "0.0.1-beta.13",
   "description": "JBrowse 2 filtering tracks, etc.",
   "keywords": [
     "jbrowse",

diff --git a/plugins/gff3/package.json b/plugins/gff3/package.json
@@ -1,6 +1,6 @@
 {
   "name": "@jbrowse/plugin-gff3",
-  "version": "0.0.1-beta.14",
+  "version": "0.0.1-beta.15",
   "description": "JBrowse 2 gff3.",
   "keywords": [
     "jbrowse",

diff --git a/plugins/hic/package.json b/plugins/hic/package.json
@@ -1,6 +1,6 @@
 {
   "name": "@jbrowse/plugin-hic",
-  "version": "0.0.1-beta.12",
+  "version": "0.0.1-beta.13",
   "description": "JBrowse 2 hic adapters, tracks, etc.",
   "keywords": [
     "jbrowse",

diff --git a/plugins/legacy-jbrowse/package.json b/plugins/legacy-jbrowse/package.json
@@ -1,6 +1,6 @@
 {
   "name": "@jbrowse/plugin-legacy-jbrowse",
-  "version": "0.0.1-beta.12",
+  "version": "0.0.1-beta.13",
   "description": "JBrowse 2 plugin for connecting to and reading JBrowse 1 data",
   "keywords": [
     "jbrowse",

diff --git a/plugins/linear-comparative-view/package.json b/plugins/linear-comparative-view/package.json
@@ -1,6 +1,6 @@
 {
   "name": "@jbrowse/plugin-linear-comparative-view",
-  "version": "0.0.1-beta.14",
+  "version": "0.0.1-beta.15",
   "description": "JBrowse 2 linear comparative view",
   "keywords": [
     "jbrowse",

diff --git a/plugins/linear-genome-view/package.json b/plugins/linear-genome-view/package.json
@@ -1,6 +1,6 @@
 {
   "name": "@jbrowse/plugin-linear-genome-view",
-  "version": "0.0.1-beta.15",
+  "version": "0.0.1-beta.16",
   "description": "JBrowse 2 linear genome view",
   "keywords": [
     "jbrowse",

diff --git a/plugins/lollipop/package.json b/plugins/lollipop/package.json
@@ -1,6 +1,6 @@
 {
   "name": "@jbrowse/plugin-lollipop",
-  "version": "0.0.1-beta.12",
+  "version": "0.0.1-beta.13",
   "description": "JBrowse 2 plugin for lollipops",
   "keywords": [
     "jbrowse",

diff --git a/plugins/menus/package.json b/plugins/menus/package.json
@@ -1,6 +1,6 @@
 {
   "name": "@jbrowse/plugin-menus",
-  "version": "0.0.1-beta.13",
+  "version": "0.0.1-beta.14",
   "description": "JBrowse 2 basic menus",
   "keywords": [
     "jbrowse",

diff --git a/plugins/protein/package.json b/plugins/protein/package.json
@@ -1,6 +1,6 @@
 {
   "name": "@jbrowse/plugin-protein",
-  "version": "0.0.1-beta.12",
+  "version": "0.0.1-beta.13",
   "description": "JBrowse 2 protein-specific renderers, etc.",
   "keywords": [
     "jbrowse",

diff --git a/plugins/rdf/package.json b/plugins/rdf/package.json
@@ -1,6 +1,6 @@
 {
   "name": "@jbrowse/plugin-rdf",
-  "version": "0.0.1-beta.12",
+  "version": "0.0.1-beta.13",
   "description": "JBrowse 2 RDF resources",
   "keywords": [
     "jbrowse",

diff --git a/plugins/sequence/package.json b/plugins/sequence/package.json
@@ -1,6 +1,6 @@
 {
   "name": "@jbrowse/plugin-sequence",
-  "version": "0.0.1-beta.13",
+  "version": "0.0.1-beta.14",
   "description": "JBrowse 2 sequence adapters, tracks, etc.",
   "keywords": [
     "jbrowse",
@@ -37,8 +37,8 @@
   "dependencies": {
     "@gmod/indexedfasta": "^1.0.13",
     "@gmod/twobit": "^1.1.10",
-    "clsx": "^1.1.0",
     "abortable-promise-cache": "^1.3.0",
+    "clsx": "^1.1.0",
     "generic-filehandle": "^2.0.1"
   },
   "peerDependencies": {

diff --git a/plugins/spreadsheet-view/package.json b/plugins/spreadsheet-view/package.json
@@ -1,6 +1,6 @@
 {
   "name": "@jbrowse/plugin-spreadsheet-view",
-  "version": "0.0.1-beta.18",
+  "version": "0.0.1-beta.19",
   "description": "JBrowse 2 spreadsheet view",
   "keywords": [
     "jbrowse",
@@ -35,8 +35,8 @@
     "useSrc": "node ../../scripts/useSrc.js"
   },
   "dependencies": {
-    "@jbrowse/plugin-variants": "^0.0.1-beta.18",
     "@gmod/vcf": "^4.0.0",
+    "@jbrowse/plugin-variants": "^0.0.1-beta.19",
     "@material-ui/icons": "^4.9.1",
     "classnames": "^2.2.6",
     "csvtojson": "^2.0.10"

diff --git a/plugins/sv-inspector/package.json b/plugins/sv-inspector/package.json
@@ -1,6 +1,6 @@
 {
   "name": "@jbrowse/plugin-sv-inspector",
-  "version": "0.0.1-beta.13",
+  "version": "0.0.1-beta.14",
   "description": "JBrowse 2 SV inspector view",
   "keywords": [
     "jbrowse",

diff --git a/plugins/svg/package.json b/plugins/svg/package.json
@@ -1,6 +1,6 @@
 {
   "name": "@jbrowse/plugin-svg",
-  "version": "0.0.1-beta.13",
+  "version": "0.0.1-beta.14",
   "description": "JBrowse 2 plugin for svg features",
   "keywords": [
     "jbrowse",

diff --git a/plugins/trackhub-registry/package.json b/plugins/trackhub-registry/package.json
@@ -1,6 +1,6 @@
 {
   "name": "@jbrowse/plugin-trackhub-registry",
-  "version": "0.0.1-beta.12",
+  "version": "0.0.1-beta.13",
   "description": "Add a connection to The Track Hub Registry",
   "keywords": [
     "jbrowse",

diff --git a/plugins/variants/package.json b/plugins/variants/package.json
@@ -1,6 +1,6 @@
 {
   "name": "@jbrowse/plugin-variants",
-  "version": "0.0.1-beta.18",
+  "version": "0.0.1-beta.19",
   "description": "JBrowse 2 variant adapters, tracks, etc.",
   "keywords": [
     "jbrowse",

diff --git a/plugins/wiggle/package.json b/plugins/wiggle/package.json
@@ -1,6 +1,6 @@
 {
   "name": "@jbrowse/plugin-wiggle",
-  "version": "0.0.1-beta.13",
+  "version": "0.0.1-beta.14",
   "description": "JBrowse 2 wiggle adapters, tracks, etc.",
   "keywords": [
     "jbrowse",

diff --git a/products/jbrowse-cli/README.md b/products/jbrowse-cli/README.md
@@ -130,7 +130,7 @@ EXAMPLES
   $ jbrowse add-assembly GRCh38.fa --target /path/to/jb2/installation/customconfig.json --load copy
 ```
 
-_See code: [src/commands/add-assembly.ts](https://github.com/GMOD/jbrowse-components/blob/%40jbrowse%2Fcli%400.0.1-beta.23/products/jbrowse-cli/src/commands/add-assembly.ts)_
+_See code: [src/commands/add-assembly.ts](https://github.com/GMOD/jbrowse-components/blob/%40jbrowse%2Fcli%400.0.1-beta.24/products/jbrowse-cli/src/commands/add-assembly.ts)_
 
 ## `jbrowse add-connection CONNECTIONURLORPATH`
 
@@ -183,7 +183,7 @@ EXAMPLES
   /path/to/jb2/installation/config.json
 ```
 
-_See code: [src/commands/add-connection.ts](https://github.com/GMOD/jbrowse-components/blob/%40jbrowse%2Fcli%400.0.1-beta.23/products/jbrowse-cli/src/commands/add-connection.ts)_
+_See code: [src/commands/add-connection.ts](https://github.com/GMOD/jbrowse-components/blob/%40jbrowse%2Fcli%400.0.1-beta.24/products/jbrowse-cli/src/commands/add-connection.ts)_
 
 ## `jbrowse add-track TRACK`
 
@@ -239,7 +239,7 @@ EXAMPLES
   $ jbrowse add-track /path/to/my.bam --config '{"defaultRendering": "density"}'
 ```
 
-_See code: [src/commands/add-track.ts](https://github.com/GMOD/jbrowse-components/blob/%40jbrowse%2Fcli%400.0.1-beta.23/products/jbrowse-cli/src/commands/add-track.ts)_
+_See code: [src/commands/add-track.ts](https://github.com/GMOD/jbrowse-components/blob/%40jbrowse%2Fcli%400.0.1-beta.24/products/jbrowse-cli/src/commands/add-track.ts)_
 
 ## `jbrowse add-track-json TRACK`
 
@@ -263,7 +263,7 @@ EXAMPLES
   $ jbrowse add-track-json track.json --update
 ```
 
-_See code: [src/commands/add-track-json.ts](https://github.com/GMOD/jbrowse-components/blob/%40jbrowse%2Fcli%400.0.1-beta.23/products/jbrowse-cli/src/commands/add-track-json.ts)_
+_See code: [src/commands/add-track-json.ts](https://github.com/GMOD/jbrowse-components/blob/%40jbrowse%2Fcli%400.0.1-beta.24/products/jbrowse-cli/src/commands/add-track-json.ts)_
 
 ## `jbrowse admin-server`
 
@@ -289,7 +289,7 @@ EXAMPLES
   $ jbrowse admin-server -p 8888
 ```
 
-_See code: [src/commands/admin-server.ts](https://github.com/GMOD/jbrowse-components/blob/%40jbrowse%2Fcli%400.0.1-beta.23/products/jbrowse-cli/src/commands/admin-server.ts)_
+_See code: [src/commands/admin-server.ts](https://github.com/GMOD/jbrowse-components/blob/%40jbrowse%2Fcli%400.0.1-beta.24/products/jbrowse-cli/src/commands/admin-server.ts)_
 
 ## `jbrowse create LOCALPATH`
 
@@ -320,7 +320,7 @@ EXAMPLES
   $ jbrowse create --listVersions # Lists out all available versions of JBrowse 2
 ```
 
-_See code: [src/commands/create.ts](https://github.com/GMOD/jbrowse-components/blob/%40jbrowse%2Fcli%400.0.1-beta.23/products/jbrowse-cli/src/commands/create.ts)_
+_See code: [src/commands/create.ts](https://github.com/GMOD/jbrowse-components/blob/%40jbrowse%2Fcli%400.0.1-beta.24/products/jbrowse-cli/src/commands/create.ts)_
 
 ## `jbrowse help [COMMAND]`
 
@@ -370,7 +370,7 @@ EXAMPLES
   $ jbrowse set-default-session --currentSession # Prints out current default session
 ```
 
-_See code: [src/commands/set-default-session.ts](https://github.com/GMOD/jbrowse-components/blob/%40jbrowse%2Fcli%400.0.1-beta.23/products/jbrowse-cli/src/commands/set-default-session.ts)_
+_See code: [src/commands/set-default-session.ts](https://github.com/GMOD/jbrowse-components/blob/%40jbrowse%2Fcli%400.0.1-beta.24/products/jbrowse-cli/src/commands/set-default-session.ts)_
 
 ## `jbrowse upgrade [LOCALPATH]`
 
@@ -400,7 +400,7 @@ EXAMPLES
   $ jbrowse upgrade --url https://sample.com/jbrowse2.zip
 ```
 
-_See code: [src/commands/upgrade.ts](https://github.com/GMOD/jbrowse-components/blob/%40jbrowse%2Fcli%400.0.1-beta.23/products/jbrowse-cli/src/commands/upgrade.ts)_
+_See code: [src/commands/upgrade.ts](https://github.com/GMOD/jbrowse-components/blob/%40jbrowse%2Fcli%400.0.1-beta.24/products/jbrowse-cli/src/commands/upgrade.ts)_
 
 <!-- commandsstop -->
 

diff --git a/products/jbrowse-cli/package.json b/products/jbrowse-cli/package.json
@@ -1,6 +1,6 @@
 {
   "name": "@jbrowse/cli",
-  "version": "0.0.1-beta.23",
+  "version": "0.0.1-beta.24",
   "description": "A command line tool for working with JBrowse 2",
   "keywords": [
     "jbrowse",