Merge pull request #29 from FZJ-INM1-BDA/add_visfAtlas

Add visf atlas
FZJ-INM1-BDA · Apr 23, 2024 · 87c0a1e · 87c0a1e
2 parents 3ad5a4f + 6ed1fa0
commit 87c0a1e
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Showing 4 changed files with 635 additions and 1 deletion.
diff --git a/atlases/human.json b/atlases/human.json
@@ -28,6 +28,7 @@
 		"https://identifiers.org/neurovault.image:23262",
 		"https://doi.org/10.1016/j.jneumeth.2020.108983/mni152",
 		"minds/core/parcellationatlas/v1.0.0/887da8eb4c36d944ef626ed5293db3ef",
-		"minds/core/parcellationatlas/v1.0.0/f2b1ac621421708c1bef422bb5058456"
+		"minds/core/parcellationatlas/v1.0.0/f2b1ac621421708c1bef422bb5058456",
+		"minds/core/parcellationatlas/v1.0.0/d41d8cd98f00b204e9800998ecf8427e"
 	]
 }
diff --git a/maps/fsaverage-visfAtlas-labelled.json b/maps/fsaverage-visfAtlas-labelled.json
@@ -0,0 +1,257 @@
+{
+	"@type": "siibra/map/v0.0.1",
+	"space": {
+		"@id": "minds/core/referencespace/v1.0.0/tmp-fsaverage"
+	},
+	"parcellation": {
+		"@id": "minds/core/parcellationatlas/v1.0.0/d41d8cd98f00b204e9800998ecf8427e"
+	},
+	"volumes": [
+		{
+			"@type": "siibra/volume/v0.0.1",
+			"providers": {
+				"zip/freesurfer-annot": {
+					"left hemisphere": "https://download.brainvoyager.com/data/visfAtlas.zip visfAtlas/FreeSurfer/lh.visfAtlas.annot",
+					"right hemisphere": "https://download.brainvoyager.com/data/visfAtlas.zip visfAtlas/FreeSurfer/rh.visfAtlas.annot"
+				},
+				"freesurfer-annot": {
+					"left hemisphere": "https://data-proxy.ebrains.eu/api/v1/buckets/reference-atlas-data/temp/lh.visfAtlas.annot",
+					"right hemisphere": "https://data-proxy.ebrains.eu/api/v1/buckets/reference-atlas-data/temp/lh.visfAtlas.annot"
+				}
+			}
+		}
+	],
+	"indices": {
+		"lh_mFus_faces": [
+			{
+				"volume": 0,
+				"fragment": "left hemisphere",
+				"label": 1
+			}
+		],
+		"lh_pFus_faces": [
+			{
+				"volume": 0,
+				"fragment": "left hemisphere",
+				"label": 2
+			}
+		],
+		"lh_IOG_faces": [
+			{
+				"volume": 0,
+				"fragment": "left hemisphere",
+				"label": 3
+			}
+		],
+		"lh_OTS_bodies": [
+			{
+				"volume": 0,
+				"fragment": "left hemisphere",
+				"label": 4
+			}
+		],
+		"lh_ITG_bodies": [
+			{
+				"volume": 0,
+				"fragment": "left hemisphere",
+				"label": 5
+			}
+		],
+		"lh_MTG_bodies": [
+			{
+				"volume": 0,
+				"fragment": "left hemisphere",
+				"label": 6
+			}
+		],
+		"lh_LOS_bodies": [
+			{
+				"volume": 0,
+				"fragment": "left hemisphere",
+				"label": 7
+			}
+		],
+		"lh_pOTS_characters": [
+			{
+				"volume": 0,
+				"fragment": "left hemisphere",
+				"label": 8
+			}
+		],
+		"lh_IOS_haracters": [
+			{
+				"volume": 0,
+				"fragment": "left hemisphere",
+				"label": 9
+			}
+		],
+		"lh_CoS_places": [
+			{
+				"volume": 0,
+				"fragment": "left hemisphere",
+				"label": 10
+			}
+		],
+		"lh_hMT": [
+			{
+				"volume": 0,
+				"fragment": "left hemisphere",
+				"label": 11
+			}
+		],
+		"lh_v1d": [
+			{
+				"volume": 0,
+				"fragment": "left hemisphere",
+				"label": 12
+			}
+		],
+		"lh_v2d": [
+			{
+				"volume": 0,
+				"fragment": "left hemisphere",
+				"label": 13
+			}
+		],
+		"lh_v3d": [
+			{
+				"volume": 0,
+				"fragment": "left hemisphere",
+				"label": 14
+			}
+		],
+		"lh_v1v": [
+			{
+				"volume": 0,
+				"fragment": "left hemisphere",
+				"label": 15
+			}
+		],
+		"lh_v2v": [
+			{
+				"volume": 0,
+				"fragment": "left hemisphere",
+				"label": 16
+			}
+		],
+		"lh_v3v": [
+			{
+				"volume": 0,
+				"fragment": "left hemisphere",
+				"label": 17
+			}
+		],
+		"rh_mFus_faces": [
+			{
+				"volume": 0,
+				"fragment": "right hemisphere",
+				"label": 1
+			}
+		],
+		"rh_pFus_faces": [
+			{
+				"volume": 0,
+				"fragment": "right hemisphere",
+				"label": 2
+			}
+		],
+		"rh_IOG_faces": [
+			{
+				"volume": 0,
+				"fragment": "right hemisphere",
+				"label": 3
+			}
+		],
+		"rh_OTS_bodies": [
+			{
+				"volume": 0,
+				"fragment": "right hemisphere",
+				"label": 4
+			}
+		],
+		"rh_ITG_bodies": [
+			{
+				"volume": 0,
+				"fragment": "right hemisphere",
+				"label": 5
+			}
+		],
+		"rh_MTG_bodies": [
+			{
+				"volume": 0,
+				"fragment": "right hemisphere",
+				"label": 6
+			}
+		],
+		"rh_LOS_bodies": [
+			{
+				"volume": 0,
+				"fragment": "right hemisphere",
+				"label": 7
+			}
+		],
+		"rh_CoS_places": [
+			{
+				"volume": 0,
+				"fragment": "right hemisphere",
+				"label": 8
+			}
+		],
+		"rh_TOS_places": [
+			{
+				"volume": 0,
+				"fragment": "right hemisphere",
+				"label": 9
+			}
+		],
+		"rh_hMT": [
+			{
+				"volume": 0,
+				"fragment": "right hemisphere",
+				"label": 10
+			}
+		],
+		"rh_v1d": [
+			{
+				"volume": 0,
+				"fragment": "right hemisphere",
+				"label": 11
+			}
+		],
+		"rh_v2d": [
+			{
+				"volume": 0,
+				"fragment": "right hemisphere",
+				"label": 12
+			}
+		],
+		"rh_v3d": [
+			{
+				"volume": 0,
+				"fragment": "right hemisphere",
+				"label": 13
+			}
+		],
+		"rh_v1v": [
+			{
+				"volume": 0,
+				"fragment": "right hemisphere",
+				"label": 14
+			}
+		],
+		"rh_v2v": [
+			{
+				"volume": 0,
+				"fragment": "right hemisphere",
+				"label": 15
+			}
+		],
+		"rh_v3v": [
+			{
+				"volume": 0,
+				"fragment": "right hemisphere",
+				"label": 16
+			}
+		]
+	}
+}