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PyScratch: an ease of use tool for analysis of Scratch assays

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ElsevierSoftwareX/PyScratch

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Clone the repository

If you don't yet have, download and install git. Use the git clone command to clone from: https://bitbucket.org/vladgaal/pyscratch_public.git .


Install dependencies

Windows users

Go to the folder ".\Dependencies" and execute the "install_all.bat" to install everything that you need to run.

Linux users

Install/update the following libraries:

pip

opencv_python

PySide

pandas

matplotlib

numpy


Run

Just execute "Pyscratch.bat" or from the command line:

python main.py

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