v1.2.3

• changes to support numpy 2.0
• better handling of non-zero return codes from external programs

v1.2.2

• support gzipped protein files as input (thanks to alienzj for the PR)

v1.2.1

• renamed private classes to resolve multiprocessing AttributeError (thanks to misialq for the PR!)

v1.2.0

• modified how bin IDs are identified to improve output tables when processing compressed files (e.g. output bin ID will be my_bin instead of my_bin.fna)

v1.1.11

• fixed error with inverse_transformed being deprecated in newer versions of Matplotlib
• updated minimum required version of Python packages

v1.1.10

• fixed bug with missing bCalledGenes flag that was impacting a number of commands

v1.1.9

• fixed support for gzip input FASTA files

v1.1.8

• updated setup.py to include long description and fix PyPi URL

v1.1.7

• added Jie Zhu's (alienzj) PR to allow input files to be specified via a file
• added Jeremy Jacobson's (jjacobson95) PR to fix prettytable import issue
• added fix by Jie Li (jili6t) regarding more stringent matching of bin extensions

v1.1.6

• allow CheckM data path to be set through the environmental variable CHECKM_DATA_PATH