Merge pull request #96 from EcoJulia/rr/show

Minor fixes

NEWS.md

@@ -1,5 +1,8 @@
 # NEWS
 
+- v0.5.2
+  - Bugfix in displaying node names
+  - Link fix
 - v0.5.1
   - Allow export of trees to nexus and newick format
     - Overload Base.write() and Base.parse()

Project.toml

@@ -3,7 +3,7 @@ uuid = "aea672f4-3940-5932-aa44-993d1c3ff149"
 author = ["Richard Reeve <Richard.Reeve@glasgow.ac.uk>",
           "Michael Krabbe Borregaard <mkborregaard@sund.ku.dk>",
           "Claire Harris <Claire.Harris@defra.gov.uk>"]
-version = "0.5.1"
+version = "0.5.2"
 
 [deps]
 AxisArrays = "39de3d68-74b9-583c-8d2d-e117c070f3a9"

README.md

@@ -16,7 +16,7 @@ installed with `add`. For example:
 (@v1.9) pkg> add Phylo
    Resolving package versions...
     Updating `~/.julia/environments/v1.9/Project.toml`
-  [aea672f4] + Phylo v0.5.0
+  [aea672f4] + Phylo v0.5.2
     Updating `~/.julia/environments/v1.9/Manifest.toml`
 
 (@v1.9) pkg>
@@ -400,6 +400,6 @@ julia> d = DataFrame(nodename=getnodename.(tree, traversal(tree, preorder)), tra
 [zenodo-badge]: https://zenodo.org/badge/93447241.svg
 [zenodo-url]: https://zenodo.org/badge/latestdoi/93447241
 
-[issues-url]: https://github.com/EcoJuli/Phylo.jl/issues
+[issues-url]: https://github.com/EcoJulia/Phylo.jl/issues
 [pr-url]: https://github.com/EcoJulia/Phylo.jl/pulls
 [diversity-url]: https://github.com/EcoJulia/Diversity.jl/

src/show.jl

@@ -35,8 +35,8 @@ function outputnode!(io::IO, tree::TREE, node, ::CompactOutput,
                                                                  String}}
     od = outdegree(tree, node)
     opening = hasinbound(tree, node) ?
-              (od > 0 ? "root node" : "unattached node") :
-              (od > 0 ? "internal node" : "leaf node")
+              (od > 0 ? "internal node" : "leaf node") :
+              (od > 0 ? "root node" : "unattached node")
     print(io, "$opening \"$(getnodename(tree, node))\"")
     return nothing
 end
@@ -48,8 +48,8 @@ function outputnode!(io::IO, tree::TREE, node, ::CompactOutput,
                                                                  <:Number}}
     od = outdegree(tree, node)
     opening = hasinbound(tree, node) ?
-              (od > 0 ? "root node" : "unattached node") :
-              (od > 0 ? "internal node" : "leaf node")
+              (od > 0 ? "internal node" : "leaf node") :
+              (od > 0 ? "root node" : "unattached node")
     print(io, "$opening $(getnodename(tree, node))")
     return nothing
 end