Create Terminator and Chapman chemistry configurations #321
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Mar 7, 2025
Tag name (required for release branches): Originator(s): @boulderdaze Description (include the issue title, and the keyword ['closes', 'fixes', 'resolves'] followed by the issue number): - Build the MUSICA library in CAM-SIMA as part of the #321 to enable the full implementation of MICM and TUV. - Update the Dockerfiles to include a newer version of ESMF that is the same version used by Derecho, and update the contents to use MUSICA schemes. - Update the README instructions for downloading submodules. - Tested case build using Docker and on Derecho. Describe any changes made to build system: Added functions to build musica in `cime_config/buildlib` Describe any changes made to the namelist: N/A List any changes to the defaults for the input datasets (e.g. boundary datasets): N/A List all files eliminated and why: N/A List all files added and what they do: ``` A cime_config/atm_musica_config.py ``` List all existing files that have been modified, and describe the changes: (Helpful git command: `git diff --name-status development...<your_branch_name>`) ``` M .dockerignore M .gitmodules M README.md M cime_config/buildlib M cime_config/buildnml M cime_config/cam_autogen.py M cime_config/cam_config.py M docker/Dockerfile M docker/Dockerfile.esmf M docker/Dockerfile.musica M src/physics/ncar_ccpp M src/physics/utils/musica_ccpp_dependencies.meta M test/unit/python/test_cam_autogen.py ``` If there are new failures (compared to the `test/existing-test-failures.txt` file), have them OK'd by the gatekeeper, note them here, and add them to the file. If there are baseline differences, include the test and the reason for the diff. What is the nature of the change? Roundoff? N/A derecho/intel/aux_sima: N/A derecho/gnu/aux_sima: N/A If this changes climate describe any run(s) done to evaluate the new climate in enough detail that it(they) could be reproduced: N/A CAM-SIMA date used for the baseline comparison tests if different than latest: --------- Co-authored-by: Jesse Nusbaumer <nusbaume@ucar.edu>
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Issue Type
Infrastructure Update, Externals Update
Issue Description
Update to use the full implementation of MICM and TUV-x in https://github.com/ESCOMP/atmospheric_physics, once it is available. Create configurations for CAM-SIMA that demonstrate photolysis rate constant calculation and gas-phase chemistry solving with Terminator and Chapman chemistry.
blocked by:
Will this change answers?
Yes
Will you be implementing this yourself?
Yes
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