Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Output BED12 rather than GTF from Mikado prepare #389

Closed
lucventurini opened this issue Mar 17, 2021 · 0 comments · Fixed by #400
Closed

Output BED12 rather than GTF from Mikado prepare #389

lucventurini opened this issue Mar 17, 2021 · 0 comments · Fixed by #400
Assignees
@ljyanesm @lucventurini
Labels
EI-Internal enhancement

Comments

@lucventurini
Copy link
Collaborator

This should be relatively easy to do: the machinery is already there. The main problem will be in changing the pipelines (Daijin, as well as REAT).
lucventurini added a commit that referenced this issue Mar 17, 2021
@lucventurini
Starting to work on #389
eea03cd
lucventurini added a commit that referenced this issue Apr 1, 2021
@lucventurini
Merge branches 'documentation-update', 'expand_attributes_uses', 'iss…
3aa57e1 
…ue-395-pick-pad-crash' and 'issue-389-prepare-bed12-output' into version-2.2.4.

Fix #136 #395 #389 #397 #396 #385
@lucventurini lucventurini mentioned this issue Apr 1, 2021
Merged
@lucventurini lucventurini linked a pull request Apr 1, 2021 that will close this issue
Version 2.2.4 #400
Merged
lucventurini added a commit that referenced this issue Apr 6, 2021
@lucventurini
Version 2.2.4 (#400)
67c7638 
Fix documentation and GHA tests.

Fix #385
Fix #389 
Fix #395 
Fix #396 
Fix #397
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Assignees

@ljyanesm ljyanesm

@lucventurini lucventurini

Labels
EI-Internal enhancement
Projects
None yet
Milestone
No milestone
Development

Successfully merging a pull request may close this issue.

Version 2.2.4 EI-CoreBioinformatics/mikado
2 participants
@ljyanesm @lucventurini