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Have mikado use the phase also for GTFs #135

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lucventurini opened this issue Oct 14, 2018 · 1 comment
Closed

Have mikado use the phase also for GTFs #135

lucventurini opened this issue Oct 14, 2018 · 1 comment
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@gemygk @lucventurini
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bug enhancement
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2.0

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@lucventurini
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At the moment mikado incorrectly considers the 8th field in GTFs as frame rather a phase (like in GFF3s). This is incorrect and makes Mikado GTF output incompatible with GenomeTools, Gffread, and ENSEMBL. Targeted for correction for 1.3.
@lucventurini lucventurini added this to the 1.3 milestone Oct 14, 2018
lucventurini added a commit that referenced this issue Oct 15, 2018
@lucventurini
#135 should be fixed and tested
fb9f5e9
@lucventurini
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This should now be fixed. Closing.

lucventurini added a commit to lucventurini/mikado that referenced this issue Feb 11, 2021
@lucventurini
EI-CoreBioinformatics#135 should be fixed and tested
b16bae9
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