Workflow file for this run
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| name: Release - executable artifacts and deb package | |
| on: | |
| push: | |
| branches: [ 'release/*' ] | |
| tags: ['v*'] | |
| pull_request: | |
| branches: [ 'release/*' ] | |
| release: | |
| types: [published] | |
| jobs: | |
| # generation of single-file executables | |
| build-executables: | |
| runs-on: ubuntu-latest | |
| permissions: | |
| contents: read | |
| packages: write | |
| steps: | |
| - name: Checkout repository with full history | |
| uses: actions/checkout@v4 | |
| with: | |
| fetch-depth: 0 # Number of commits to fetch. 0 indicates all history for all branches and tags. | |
| - name: Build Docker image with pyinstaller and pymchelper inside | |
| run: docker build --tag pymchelper . | |
| - name: Generate single-file executables for mcscripter | |
| run: docker run --volume `pwd`/dist:/app/dist pymchelper:latest pyinstaller --add-data 'pymchelper/VERSION:pymchelper' --onefile --name mcscripter pymchelper/utils/mcscripter.py | |
| - name: Generate single-file executables for plan2sobp | |
| run: docker run --volume `pwd`/dist:/app/dist pymchelper:latest pyinstaller --add-data 'pymchelper/VERSION:pymchelper' --onefile --hiddenimport='pydicom.encoders.gdcm' --hiddenimport='pydicom.encoders.pylibjpeg' --hidden-import='scipy.spatial.transform._rotation_groups' --name plan2sobp pymchelper/utils/radiotherapy/plan.py | |
| - name: Generate single-file executables for runmc | |
| run: docker run --volume `pwd`/dist:/app/dist pymchelper:latest pyinstaller runmc.spec | |
| - name: Generate single-file executables for convertmc | |
| run: docker run --volume `pwd`/dist:/app/dist pymchelper:latest pyinstaller convertmc.spec | |
| - name: Test single-file executables | |
| run: | | |
| ls -alh ./dist/ | |
| ./dist/mcscripter --version | |
| ./dist/plan2sobp --version | |
| ./dist/runmc --version | |
| ./dist/convertmc --version | |
| docker run -v `pwd`/dist:/test/ ubuntu:12.04 /test/convertmc --version | |
| docker run -v `pwd`/dist:/test/ debian:stable /test/convertmc --version | |
| - name: Archive executables as artifacts | |
| uses: actions/upload-artifact@v4 | |
| with: | |
| name: executables | |
| path: ./dist | |
| # upload of single-file executables to release assets | |
| upload-executables: | |
| runs-on: ubuntu-latest | |
| needs: [build-executables] | |
| steps: | |
| - name: Checkout repository with full history | |
| uses: actions/checkout@v4 | |
| with: | |
| fetch-depth: 0 # Number of commits to fetch. 0 indicates all history for all branches and tags. | |
| - uses: actions/download-artifact@v4 | |
| with: | |
| name: executables | |
| path: ./dist | |
| - name: Add artifact with util files to the release | |
| uses: ncipollo/release-action@v1.14.0 | |
| if: startsWith(github.ref, 'refs/tags/v') | |
| with: | |
| allowUpdates: true | |
| # An optional set of paths representing artifacts to upload to the release. This may be a single path or a comma delimited list of paths (or globs) | |
| artifacts: './dist/*' | |
| token: ${{ secrets.GITHUB_TOKEN }} | |
| generate-deb-packages: | |
| runs-on: ubuntu-latest | |
| needs: [build-executables] | |
| steps: | |
| - name: Checkout repository with full history | |
| uses: actions/checkout@v4 | |
| - uses: actions/download-artifact@v4 | |
| with: | |
| name: executables | |
| path: ./dist | |
| - name: Generate deb packages | |
| working-directory: debian_packages | |
| run: ./generate_deb_packages.sh convertmc runmc mcscripter | |
| - name: Archive deb package as artifacts | |
| uses: actions/upload-artifact@v4 | |
| with: | |
| name: deb | |
| path: 'debian_packages/*.deb' | |
| test_deb: | |
| runs-on: ubuntu-latest | |
| needs: [generate-deb-packages] | |
| strategy: | |
| matrix: | |
| docker-tag: ['debian:12', 'debian:stable', 'ubuntu:18.04', 'ubuntu:20.04', 'ubuntu:21.04', 'ubuntu:22.04', 'ubuntu:23.04', 'ubuntu:24.04'] | |
| steps: | |
| - uses: actions/download-artifact@v4 | |
| with: | |
| name: deb | |
| path: ./ | |
| - name: Inspect artifacts | |
| run: find . -name "*.deb" -printf 'Contents of package %p\n' -exec dpkg-deb --contents {} \; | |
| - name: Test installation | |
| run: docker run --volume `pwd`:/pkg ${{ matrix.docker-tag }} /bin/sh -c "ldd --version; dpkg --install /pkg/pymchelper-*.deb; convertmc --version; runmc --version" | |
| repo_prepare: | |
| runs-on: ubuntu-latest | |
| needs: [generate-deb-packages] | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - uses: actions/download-artifact@v4 | |
| with: | |
| name: deb | |
| path: debian_packages/ | |
| - name: Import GPG key from a secret variable | |
| id: import_gpg | |
| uses: crazy-max/ghaction-import-gpg@v6 | |
| with: | |
| gpg_private_key: ${{ secrets.GPG_PRIVATE_KEY }} | |
| - name: Print GPG user IDs and save files to be included in repository | |
| working-directory: debian_packages | |
| run: | | |
| echo "fingerprint: ${{ steps.import_gpg.outputs.fingerprint }}" | |
| echo "keyid: ${{ steps.import_gpg.outputs.keyid }}" | |
| echo "name: ${{ steps.import_gpg.outputs.name }}" | |
| echo "email: ${{ steps.import_gpg.outputs.email }}" | |
| echo "${{ steps.import_gpg.outputs.fingerprint }}" > key_fingerprint.txt | |
| gpg --export --armor --output public.gpg | |
| - name: Create reposity and add packages | |
| working-directory: debian_packages | |
| run: ./add_packages_to_repo.sh | |
| - name: Archive directory with repository as artifact | |
| uses: actions/upload-artifact@v4 | |
| with: | |
| name: repo | |
| path: 'debian_packages/public' | |
| repo_upload: | |
| runs-on: ubuntu-latest | |
| needs: [repo_prepare, test_deb] | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - uses: actions/download-artifact@v4 | |
| with: | |
| name: repo | |
| path: debian_packages/public | |
| - name: Tuning | |
| working-directory: debian_packages | |
| run: | | |
| mv datamedsci.list public/ | |
| touch public/.nojekyll | |
| - name: Deploy to GitHub Pages | |
| uses: JamesIves/github-pages-deploy-action@v4.7.2 | |
| if: startsWith(github.ref, 'refs/tags/v') | |
| with: | |
| branch: gh-pages # The branch the action should deploy to. | |
| folder: debian_packages/public # The folder the action should deploy. | |
| repository-name: DataMedSci/deb_package_repository | |
| ssh-key: ${{ secrets.DEB_REPO_PRIVATE_KEY }} | |
| clean: true | |
| single-commit: true |