#2340: Fix missing NumPy package

[thearusable]

Fixes #2340

[github-actions]

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PR tests (gcc-12, ubuntu, mpich, verbose, kokkos)

Build for ac48aee (2024-09-10 17:35:24 UTC)

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PR tests (gcc-9, ubuntu, mpich, zoltan, json schema test)

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PR tests (gcc-10, ubuntu, openmpi, no LB)

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PR tests (clang-9, ubuntu, mpich)

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PR tests (clang-12, ubuntu, mpich)

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PR tests (intel icpx, ubuntu, mpich, verbose)

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PR tests (gcc-11, ubuntu, mpich, trace runtime, coverage)

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PR tests (nvidia cuda 11.2, gcc-9, ubuntu, mpich)

Build for ac48aee (2024-09-10 17:35:24 UTC)

/vt/src/vt/pipe/pipe_manager.impl.h(135): warning: missing return statement at end of non-void function "vt::pipe::PipeManager::makeSend<f,Target>(Target) [with f=&vt::vrt::collection::lb::GreedyLB::collectHandler, Target=vt::objgroup::proxy::ProxyElm<vt::vrt::collection::lb::GreedyLB>]"
          detected during:
            instantiation of "auto vt::pipe::PipeManager::makeSend<f,Target>(Target) [with f=&vt::vrt::collection::lb::GreedyLB::collectHandler, Target=vt::objgroup::proxy::ProxyElm<vt::vrt::collection::lb::GreedyLB>]" 
/vt/src/vt/objgroup/proxy/proxy_objgroup.impl.h(221): here
            instantiation of "vt::objgroup::proxy::Proxy<ObjT>::PendingSendType vt::objgroup::proxy::Proxy<ObjT>::reduce<f,Op,Target,Args...>(Target, Args &&...) const [with ObjT=vt::vrt::collection::lb::GreedyLB, f=&vt::vrt::collection::lb::GreedyLB::collectHandler, Op=vt::collective::PlusOp, Target=vt::objgroup::proxy::ProxyElm<vt::vrt::collection::lb::GreedyLB>, Args=<vt::vrt::collection::lb::GreedyPayload>]" 
/vt/src/vt/vrt/collection/balance/greedylb/greedylb.cc(222): here

/vt/src/vt/pipe/pipe_manager.impl.h(135): warning: missing return statement at end of non-void function "vt::pipe::PipeManager::makeSend<f,Target>(Target) [with f=&MyObj::handler, Target=vt::objgroup::proxy::ProxyElm<MyObj>]"
          detected during instantiation of "auto vt::pipe::PipeManager::makeSend<f,Target>(Target) [with f=&MyObj::handler, Target=vt::objgroup::proxy::ProxyElm<MyObj>]" 
/vt/examples/callback/callback.cc(147): here

/vt/src/vt/pipe/pipe_manager.impl.h(135): warning: missing return statement at end of non-void function "vt::pipe::PipeManager::makeSend<f,Target>(Target) [with f=&colHan, Target=vt::vrt::collection::VrtElmProxy<MyCol, vt::Index1D>]"
          detected during instantiation of "auto vt::pipe::PipeManager::makeSend<f,Target>(Target) [with f=&colHan, Target=vt::vrt::collection::VrtElmProxy<MyCol, vt::Index1D>]" 
/vt/examples/callback/callback.cc(153): here

/vt/src/vt/pipe/pipe_manager.impl.h(135): warning: missing return statement at end of non-void function "vt::pipe::PipeManager::makeSend<f,Target>(Target) [with f=&MyObj::handler, Target=vt::objgroup::proxy::ProxyElm<MyObj>]"
          detected during instantiation of "auto vt::pipe::PipeManager::makeSend<f,Target>(Target) [with f=&MyObj::handler, Target=vt::objgroup::proxy::ProxyElm<MyObj>]" 
/vt/examples/callback/callback.cc(147): here

/vt/src/vt/pipe/pipe_manager.impl.h(135): warning: missing return statement at end of non-void function "vt::pipe::PipeManager::makeSend<f,Target>(Target) [with f=&colHan, Target=vt::vrt::collection::VrtElmProxy<MyCol, vt::Index1D>]"
          detected during instantiation of "auto vt::pipe::PipeManager::makeSend<f,Target>(Target) [with f=&colHan, Target=vt::vrt::collection::VrtElmProxy<MyCol, vt::Index1D>]" 
/vt/examples/callback/callback.cc(153%0D%0A%0D%0A%0D%0A ==> And there is more. Read log. <==

Build log

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PR tests (intel icpc, ubuntu, mpich)

Build for ac48aee (2024-09-10 17:35:24 UTC)

remark #11074: Inlining inhibited by limit max-size 
remark #11074: Inlining inhibited by limit max-total-size 
remark #11076: To get full report use -qopt-report=4 -qopt-report-phase ipo
remark #11074: Inlining inhibited by limit max-size 
remark #11074: Inlining inhibited by limit max-total-size 
remark #11076: To get full report use -qopt-report=4 -qopt-report-phase ipo
remark #11074: Inlining inhibited by limit max-size 
remark #11074: Inlining inhibited by limit max-total-size 
remark #11076: To get full report use -qopt-report=4 -qopt-report-phase ipo
remark #11074: Inlining inhibited by limit max-size 
remark #11074: Inlining inhibited by limit max-total-size 
remark #11076: To get full report use -qopt-report=4 -qopt-report-phase ipo
remark #11074: Inlining inhibited by limit max-size 
remark #11074: Inlining inhibited by limit max-total-size 
remark #11076: To get full report use -qopt-report=4 -qopt-report-phase ipo
remark #11074: Inlining inhibited by limit max-size 
remark #11074: Inlining inhibited by limit max-total-size 
remark #11076: To get full report use -qopt-report=4 -qopt-report-phase ipo
remark #11074: Inlining inhibited by limit max-total-size 
remark #11076: To get full report use -qopt-report=4 -qopt-report-phase ipo
remark #11074: Inlining inhibited by limit max-total-size 
remark #11076: To get full report use -qopt-report=4 -qopt-report-phase ipo
remark #11074: Inlining inhibited by limit max-total-size 
remark #11076: To get full report use -qopt-report=4 -qopt-report-phase ipo
remark #11074: Inlining inhibited by limit max-size 
remark #11074: Inlining inhibited by limit max-total-size 
remark #11076: To get full report use -qopt-report=4 -qopt-report-phase ipo
remark #11074: Inlining inhibited by limit max-size 
remark #11074: Inlining inhibited by limit max-total-size 
remark #11076: To get full report use -qopt-report=4 -qopt-report-phase ipo
remark #11074: Inlining inhibited by limit max-size 
remark #11074: Inlining inhibited by limit max-total-size 
remark #11076: To get full report use -qopt-report=4 -qopt-report-phase ipo
remark #11074: Inlining inhibited by limit max-size 
remark #11074: Inlining inhibited by limit max-total-size 
remark #11076: To get full report use -qopt-report=4 -qopt-report-phase ipo
remark #11074: Inlining inhibited by limit max-size 
remark #11074: Inlining inhibited by limit max-total-size 
remark #11076: To get full report use -qopt-report=4 -qopt-report-phase ipo
remark #11074: Inlining inhibited by limit max-size 
remark #11074: Inlining inhibited by limit max-total-size 
remark #11076: To get full report use -qopt-report=4 -qopt-report-phase ipo
remark #11074: Inlining inhibited by limit max-size 
remark #11074: Inlining inhi%0D%0A%0D%0A%0D%0A ==> And there is more. Read log. <==

Build log

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PR tests (nvidia cuda 12.2.0, gcc-9, ubuntu, mpich, verbose)

Build for ac48aee (2024-09-10 17:35:24 UTC)

/vt/lib/CLI/CLI/CLI11.hpp(1029): warning #2361-D: invalid narrowing conversion from "double" to "unsigned long"
          TT { std::declval<CC>() }
               ^
          detected during:
            instantiation of "vt::CLI::detail::is_direct_constructible<T, C>::test [with T=std::vector<std::string, std::allocator<std::string>>, C=double]" based on template arguments <std::vector<std::string, std::allocator<std::string>>, double> at line 1041
            instantiation of class "vt::CLI::detail::is_direct_constructible<T, C> [with T=std::vector<std::string, std::allocator<std::string>>, C=double]" at line 5005
            instantiation of "void vt::CLI::Option::results(T &) const [with T=std::vector<std::string, std::allocator<std::string>>]" at line 5034
            instantiation of "T vt::CLI::Option::as<T>() const [with T=std::vector<std::string, std::allocator<std::string>>]" at line 7315

Remark: The warnings can be suppressed with "-diag-suppress <warning-number>"

/vt/lib/CLI/CLI/CLI11.hpp(1029): warning #2361-D: invalid narrowing conversion from "int" to "unsigned long"
          TT { std::declval<CC>() }
               ^
          detected during:
            instantiation of "vt::CLI::detail::is_direct_constructible<T, C>::test [with T=std::vector<std::string, std::allocator<std::string>>, C=int]" based on template arguments <std::vector<std::string, std::allocator<std::string>>, int> at line 1041
            instantiation of class "vt::CLI::detail::is_direct_constructible<T, C> [with T=std::vector<std::string, std::allocator<std::string>>, C=int]" at line 5005
            instantiation of "void vt::CLI::Option::results(T &) const [with T=std::vector<std::string, std::allocator<std::string>>]" at line 5034
            instantiation of "T vt::CLI::Option::as<T>() const [with T=std::vector<std::string, std::allocator<std::string>>]" at line 7315

/vt/tests/perf/send_cost.cc(169): warning #177-D: variable "prevNode" was declared but never referenced
    auto const prevNode = (thisNode - 1 + num_nodes_) % num_nodes_;
               ^

Remark: The warnings can be suppressed with "-diag-suppress <warning-number>"

Testing - passed

Build log

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[thearusable]

The issue was caused by a bug in DeepDiff v7. The NumPy dependency wasn't properly set up, so it wasn't installed, but it was required by a module from DeepDiff. After the change in the PR, the Docker image will be rebuilt, and the newest version of DeepDiff will be downloaded, which contains a bugfix for that issue.

From the logs on develop, pushing a Docker image to Docker Hub seems to work correctly.

[cwschilly]

This fixed the problem on #2294

[thearusable]

This PR is not technically necessary to be merged. The new image was pushed from a modified CI run, and this change was needed as a trigger to rebuild the image. The PR only removes a duplicated entry for python3 on the packages list for apt.

[nlslatt]

This PR contained an incidental fix that was not strictly necessary for fixing the missing numpy package.