CliMA · costachris · Feb 3, 2024 · Feb 1, 2024
diff --git a/.buildkite/pipeline.yml b/.buildkite/pipeline.yml
@@ -1,5 +1,5 @@
 env:
-  JULIA_VERSION: "1.9.3"
+  JULIA_VERSION: "1.10.0"
   SLURM_CPUS_PER_TASK: 1
   OPENMPI_VERSION: "4.0.4"
   CUDA_VERSION: "11.2"

diff --git a/.github/workflows/CodeCov.yml b/.github/workflows/CodeCov.yml
@@ -15,7 +15,7 @@ jobs:
     - name: Set up Julia
       uses: julia-actions/setup-julia@latest
       with:
-        version: 1.9.3
+        version: 1.10.0
 
     - name: Test with coverage
       env:

diff --git a/.github/workflows/JuliaFormatter.yml b/.github/workflows/JuliaFormatter.yml
@@ -27,7 +27,7 @@ jobs:
     - uses: julia-actions/setup-julia@latest
       if: steps.filter.outputs.julia_file_change == 'true'
       with:
-        version: 1.9.3
+        version: 1.10.0
 
     - name: Apply JuliaFormatter
       if: steps.filter.outputs.julia_file_change == 'true'

diff --git a/.github/workflows/UpDeps.yml b/.github/workflows/UpDeps.yml
@@ -19,7 +19,7 @@ jobs:
 
     - uses: julia-actions/setup-julia@latest
       with:
-        version: 1.9.3
+        version: 1.10.0
 
     - name: Apply UpDeps
       run: |

diff --git a/.github/workflows/ci.yml b/.github/workflows/ci.yml
@@ -14,7 +14,7 @@ jobs:
       fail-fast: false
       matrix:
         version:
-          - '1.9.3'
+          - '1.10.0'
         os:
           - ubuntu-latest
           - macOS-latest

diff --git a/.github/workflows/docs.yml b/.github/workflows/docs.yml
@@ -14,7 +14,7 @@ jobs:
       - uses: actions/checkout@v2
       - uses: julia-actions/setup-julia@latest
         with:
-          version: 1.9.3
+          version: 1.10.0
       - name: Install dependencies
         run: julia --project=docs/ -e 'using Pkg; Pkg.develop(PackageSpec(path=pwd())); Pkg.instantiate()'
       - name: Build and deploy

diff --git a/experiments/SCT1_benchmark/global_parallel/ekp_par_calibration.sbatch b/experiments/SCT1_benchmark/global_parallel/ekp_par_calibration.sbatch
@@ -19,7 +19,7 @@ n_proc_scm=10
 echo "Initializing calibration with ${n} ensemble members and ${n_it} iterations."
 
 module purge
-module load julia/1.9.3 openmpi/4.1.5
+module load julia/1.10.0 openmpi/4.1.5
 
 export JULIA_NUM_THREADS=${SLURM_CPUS_PER_TASK:=1}
 export JULIA_MPI_BINARY=system

diff --git a/experiments/SCT1_benchmark/global_parallel/init.sbatch b/experiments/SCT1_benchmark/global_parallel/init.sbatch
@@ -7,7 +7,7 @@
 #SBATCH -J "sct_init"   # job name
 
 #julia package management
-module load julia/1.9.3 openmpi/4.1.5
+module load julia/1.10.0 openmpi/4.1.5
 
 config=${1?Error: no config file given}
 job_id=${2?Error: no job ID given}

diff --git a/experiments/SCT1_benchmark/global_parallel/parallel_scm_eval.sbatch b/experiments/SCT1_benchmark/global_parallel/parallel_scm_eval.sbatch
@@ -5,7 +5,7 @@
 #SBATCH --mem-per-cpu=6G   # memory per CPU core
 #SBATCH -J "sct_run"   # job name
 
-module load julia/1.9.3 openmpi/4.1.5
+module load julia/1.10.0 openmpi/4.1.5
 iteration_=${1?Error: no iteration given}
 job_id=${2?Error: no job ID given}
 n_proc_scm=${3?Error: number of processes not given}

diff --git a/experiments/SCT1_benchmark/global_parallel/precondition_prior.sbatch b/experiments/SCT1_benchmark/global_parallel/precondition_prior.sbatch
@@ -6,7 +6,7 @@
 #SBATCH --mem-per-cpu=6G   # memory per CPU core
 #SBATCH -J "precond"   # job name
 
-module load julia/1.9.3 openmpi/4.1.5
+module load julia/1.10.0 openmpi/4.1.5
 iteration_=${1?Error: no iteration given}
 job_id=${2?Error: no job ID given}
 

diff --git a/experiments/SCT1_benchmark/global_parallel/restart.sbatch b/experiments/SCT1_benchmark/global_parallel/restart.sbatch
@@ -6,7 +6,7 @@
 #SBATCH --mem-per-cpu=6G   # memory per CPU core
 #SBATCH -J "restart"   # job name
 
-module load julia/1.9.3 openmpi/4.1.5
+module load julia/1.10.0 openmpi/4.1.5
 
 output_dir=${1?Error: no output directory given}
 job_id=${2?Error: no job ID given}

diff --git a/experiments/SCT1_benchmark/global_parallel/restart_ekp_par_calibration.sbatch b/experiments/SCT1_benchmark/global_parallel/restart_ekp_par_calibration.sbatch
@@ -26,7 +26,7 @@ n_proc_scm=10
 echo "Restarting calibration with ${n} ensemble members and ${n_it} iterations (grand total)."
 
 module purge
-module load julia/1.9.3 openmpi/4.1.5
+module load julia/1.10.0 openmpi/4.1.5
 
 export JULIA_NUM_THREADS=${SLURM_CPUS_PER_TASK:=1}
 export JULIA_MPI_BINARY=system

diff --git a/experiments/SCT1_benchmark/global_parallel/step_ekp.sbatch b/experiments/SCT1_benchmark/global_parallel/step_ekp.sbatch
@@ -6,7 +6,7 @@
 #SBATCH --mem-per-cpu=6G   # memory per CPU core
 #SBATCH -J "sct_cont"   # job name
 
-module load julia/1.9.3 openmpi/4.1.5
+module load julia/1.10.0 openmpi/4.1.5
 iteration_=${1?Error: no iteration given}
 job_id=${2?Error: no job ID given}
 job_dir=$(head $job_id".txt" | tail -1)

diff --git a/experiments/SCT1_benchmark/global_parallel/sysimage.sbatch b/experiments/SCT1_benchmark/global_parallel/sysimage.sbatch
@@ -6,7 +6,7 @@
 #SBATCH --mem-per-cpu=20G   # memory per CPU core
 #SBATCH -J "sys_im"   # job name
 
-module load julia/1.9.3 openmpi/4.1.5
+module load julia/1.10.0 openmpi/4.1.5
 
 julia --project -C skylake-avx512 create_tc_so.jl
 

diff --git a/experiments/SCT2_benchmark/global_parallel/ekp_par_calibration.sbatch b/experiments/SCT2_benchmark/global_parallel/ekp_par_calibration.sbatch
@@ -19,7 +19,7 @@ n_proc_scm=10
 echo "Initializing calibration with ${n} ensemble members and ${n_it} iterations."
 
 module purge
-module load julia/1.9.3 openmpi/4.1.5
+module load julia/1.10.0 openmpi/4.1.5
 
 export JULIA_NUM_THREADS=${SLURM_CPUS_PER_TASK:=1}
 export JULIA_MPI_BINARY=system

diff --git a/experiments/SCT2_benchmark/global_parallel/init.sbatch b/experiments/SCT2_benchmark/global_parallel/init.sbatch
@@ -7,7 +7,7 @@
 #SBATCH -J "sct_init"   # job name
 
 #julia package management
-module load julia/1.9.3 openmpi/4.1.5
+module load julia/1.10.0 openmpi/4.1.5
 
 config=${1?Error: no config file given}
 job_id=${2?Error: no job ID given}

diff --git a/experiments/SCT2_benchmark/global_parallel/parallel_scm_eval.sbatch b/experiments/SCT2_benchmark/global_parallel/parallel_scm_eval.sbatch
@@ -5,7 +5,7 @@
 #SBATCH --mem-per-cpu=6G   # memory per CPU core
 #SBATCH -J "sct_run"   # job name
 
-module load julia/1.9.3 openmpi/4.1.5
+module load julia/1.10.0 openmpi/4.1.5
 iteration_=${1?Error: no iteration given}
 job_id=${2?Error: no job ID given}
 n_proc_scm=${3?Error: number of processes not given}

diff --git a/experiments/SCT2_benchmark/global_parallel/precondition_prior.sbatch b/experiments/SCT2_benchmark/global_parallel/precondition_prior.sbatch
@@ -6,7 +6,7 @@
 #SBATCH --mem-per-cpu=6G   # memory per CPU core
 #SBATCH -J "precond"   # job name
 
-module load julia/1.9.3 openmpi/4.1.5
+module load julia/1.10.0 openmpi/4.1.5
 iteration_=${1?Error: no iteration given}
 job_id=${2?Error: no job ID given}
 

diff --git a/experiments/SCT2_benchmark/global_parallel/restart.sbatch b/experiments/SCT2_benchmark/global_parallel/restart.sbatch
@@ -6,7 +6,7 @@
 #SBATCH --mem-per-cpu=6G   # memory per CPU core
 #SBATCH -J "restart"   # job name
 
-module load julia/1.9.3 openmpi/4.1.5
+module load julia/1.10.0 openmpi/4.1.5
 
 output_dir=${1?Error: no output directory given}
 job_id=${2?Error: no job ID given}

diff --git a/experiments/SCT2_benchmark/global_parallel/restart_ekp_par_calibration.sbatch b/experiments/SCT2_benchmark/global_parallel/restart_ekp_par_calibration.sbatch
@@ -26,7 +26,7 @@ n_proc_scm=10
 echo "Restarting calibration with ${n} ensemble members and ${n_it} iterations (grand total)."
 
 module purge
-module load julia/1.9.3 openmpi/4.1.5
+module load julia/1.10.0 openmpi/4.1.5
 
 export JULIA_NUM_THREADS=${SLURM_CPUS_PER_TASK:=1}
 export JULIA_MPI_BINARY=system

diff --git a/experiments/SCT2_benchmark/global_parallel/step_ekp.sbatch b/experiments/SCT2_benchmark/global_parallel/step_ekp.sbatch
@@ -6,7 +6,7 @@
 #SBATCH --mem-per-cpu=6G   # memory per CPU core
 #SBATCH -J "sct_cont"   # job name
 
-module load julia/1.9.3 openmpi/4.1.5
+module load julia/1.10.0 openmpi/4.1.5
 iteration_=${1?Error: no iteration given}
 job_id=${2?Error: no job ID given}
 job_dir=$(head $job_id".txt" | tail -1)

diff --git a/experiments/SCT2_benchmark/global_parallel/sysimage.sbatch b/experiments/SCT2_benchmark/global_parallel/sysimage.sbatch
@@ -6,7 +6,7 @@
 #SBATCH --mem-per-cpu=20G   # memory per CPU core
 #SBATCH -J "sys_im"   # job name
 
-module load julia/1.9.3 openmpi/4.1.5
+module load julia/1.10.0 openmpi/4.1.5
 
 julia --project -C skylake-avx512 create_tc_so.jl
 

diff --git a/experiments/SCT3_benchmark/global_parallel/ekp_par_calibration.sbatch b/experiments/SCT3_benchmark/global_parallel/ekp_par_calibration.sbatch
@@ -19,7 +19,7 @@ n_proc_scm=10
 echo "Initializing calibration with ${n} ensemble members and ${n_it} iterations."
 
 module purge
-module load julia/1.9.3 openmpi/4.1.5
+module load julia/1.10.0 openmpi/4.1.5
 
 export JULIA_NUM_THREADS=${SLURM_CPUS_PER_TASK:=1}
 export JULIA_MPI_BINARY=system

diff --git a/experiments/SCT3_benchmark/global_parallel/init.sbatch b/experiments/SCT3_benchmark/global_parallel/init.sbatch
@@ -7,7 +7,7 @@
 #SBATCH -J "sct_init"   # job name
 
 #julia package management
-module load julia/1.9.3 openmpi/4.1.5
+module load julia/1.10.0 openmpi/4.1.5
 
 config=${1?Error: no config file given}
 job_id=${2?Error: no job ID given}

diff --git a/experiments/SCT3_benchmark/global_parallel/parallel_scm_eval.sbatch b/experiments/SCT3_benchmark/global_parallel/parallel_scm_eval.sbatch
@@ -5,7 +5,7 @@
 #SBATCH --mem-per-cpu=10G   # memory per CPU core
 #SBATCH -J "sct_run"   # job name
 
-module load julia/1.9.3 openmpi/4.1.5
+module load julia/1.10.0 openmpi/4.1.5
 iteration_=${1?Error: no iteration given}
 job_id=${2?Error: no job ID given}
 n_proc_scm=${3?Error: number of processes not given}

diff --git a/experiments/SCT3_benchmark/global_parallel/precondition_prior.sbatch b/experiments/SCT3_benchmark/global_parallel/precondition_prior.sbatch
@@ -6,7 +6,7 @@
 #SBATCH --mem-per-cpu=6G   # memory per CPU core
 #SBATCH -J "precond"   # job name
 
-module load julia/1.9.3 openmpi/4.1.5
+module load julia/1.10.0 openmpi/4.1.5
 iteration_=${1?Error: no iteration given}
 job_id=${2?Error: no job ID given}
 

diff --git a/experiments/SCT3_benchmark/global_parallel/restart.sbatch b/experiments/SCT3_benchmark/global_parallel/restart.sbatch
@@ -6,7 +6,7 @@
 #SBATCH --mem-per-cpu=6G   # memory per CPU core
 #SBATCH -J "restart"   # job name
 
-module load julia/1.9.3 openmpi/4.1.5
+module load julia/1.10.0 openmpi/4.1.5
 
 output_dir=${1?Error: no output directory given}
 job_id=${2?Error: no job ID given}

diff --git a/experiments/SCT3_benchmark/global_parallel/restart_ekp_par_calibration.sbatch b/experiments/SCT3_benchmark/global_parallel/restart_ekp_par_calibration.sbatch
@@ -26,7 +26,7 @@ n_proc_scm=10
 echo "Restarting calibration with ${n} ensemble members and ${n_it} iterations (grand total)."
 
 module purge
-module load julia/1.9.3 openmpi/4.1.5
+module load julia/1.10.0 openmpi/4.1.5
 
 export JULIA_NUM_THREADS=${SLURM_CPUS_PER_TASK:=1}
 export JULIA_MPI_BINARY=system

diff --git a/experiments/SCT3_benchmark/global_parallel/step_ekp.sbatch b/experiments/SCT3_benchmark/global_parallel/step_ekp.sbatch
@@ -6,7 +6,7 @@
 #SBATCH --mem-per-cpu=6G   # memory per CPU core
 #SBATCH -J "sct_cont"   # job name
 
-module load julia/1.9.3 openmpi/4.1.5
+module load julia/1.10.0 openmpi/4.1.5
 iteration_=${1?Error: no iteration given}
 job_id=${2?Error: no job ID given}
 job_dir=$(head $job_id".txt" | tail -1)

diff --git a/experiments/SCT3_benchmark/global_parallel/sysimage.sbatch b/experiments/SCT3_benchmark/global_parallel/sysimage.sbatch
@@ -6,7 +6,7 @@
 #SBATCH --mem-per-cpu=20G   # memory per CPU core
 #SBATCH -J "sys_im"   # job name
 
-module load julia/1.9.3 openmpi/4.1.5
+module load julia/1.10.0 openmpi/4.1.5
 
 julia --project -C skylake-avx512 create_tc_so.jl
 

diff --git a/experiments/grid_search/restart_grid_search.sbatch b/experiments/grid_search/restart_grid_search.sbatch
@@ -11,6 +11,6 @@
 outdir=${1?Error: no output directory given}
 
 module purge
-module load julia/1.9.3 openmpi/4.1.5
+module load julia/1.10.0 openmpi/4.1.5
 julia --project -e 'using Pkg; Pkg.instantiate(); Pkg.API.precompile()'
 julia --project -p 25 grid_search.jl --outdir $outdir --mode restart
diff --git a/experiments/grid_search/run_grid_search.sbatch b/experiments/grid_search/run_grid_search.sbatch
@@ -11,6 +11,6 @@
 config=${1?Error: no config file given}
 
 module purge
-module load julia/1.9.3 openmpi/4.1.5
+module load julia/1.10.0 openmpi/4.1.5
 julia --project -e 'using Pkg; Pkg.instantiate(); Pkg.API.precompile()'
 julia --project -p 25 grid_search.jl --config $config --mode new
diff --git a/experiments/grid_search/run_loss_map.sbatch b/experiments/grid_search/run_loss_map.sbatch
@@ -11,6 +11,6 @@
 sim_dir=${1?Error: no simulation path given}
 
 module purge
-module load julia/1.9.3 openmpi/4.1.5
+module load julia/1.10.0 openmpi/4.1.5
 julia --project -e 'using Pkg; Pkg.instantiate(); Pkg.API.precompile()'
 julia --project -p 25 loss_map.jl --sim_dir $sim_dir
diff --git a/experiments/les_strats/global_parallel/ekp_par_calibration.sbatch b/experiments/les_strats/global_parallel/ekp_par_calibration.sbatch
@@ -19,7 +19,7 @@ n_proc_scm=10
 echo "Initializing calibration with ${n} ensemble members and ${n_it} iterations."
 
 module purge
-module load julia/1.9.3 openmpi/4.1.5
+module load julia/1.10.0 openmpi/4.1.5
 
 export JULIA_NUM_THREADS=${SLURM_CPUS_PER_TASK:=1}
 export JULIA_MPI_BINARY=system

diff --git a/experiments/les_strats/global_parallel/init.sbatch b/experiments/les_strats/global_parallel/init.sbatch
@@ -7,7 +7,7 @@
 #SBATCH -J "sct_init"   # job name
 
 #julia package management
-module load julia/1.9.3 openmpi/4.1.5
+module load julia/1.10.0 openmpi/4.1.5
 
 config=${1?Error: no config file given}
 job_id=${2?Error: no job ID given}

diff --git a/experiments/les_strats/global_parallel/parallel_scm_eval.sbatch b/experiments/les_strats/global_parallel/parallel_scm_eval.sbatch
@@ -5,7 +5,7 @@
 #SBATCH --mem-per-cpu=6G   # memory per CPU core
 #SBATCH -J "sct_run"   # job name
 
-module load julia/1.9.3 openmpi/4.1.5
+module load julia/1.10.0 openmpi/4.1.5
 iteration_=${1?Error: no iteration given}
 job_id=${2?Error: no job ID given}
 n_proc_scm=${3?Error: number of processes not given}

diff --git a/experiments/les_strats/global_parallel/precondition_prior.sbatch b/experiments/les_strats/global_parallel/precondition_prior.sbatch
@@ -6,7 +6,7 @@
 #SBATCH --mem-per-cpu=6G   # memory per CPU core
 #SBATCH -J "precond"   # job name
 
-module load julia/1.9.3 openmpi/4.1.5
+module load julia/1.10.0 openmpi/4.1.5
 iteration_=${1?Error: no iteration given}
 job_id=${2?Error: no job ID given}
 

diff --git a/experiments/les_strats/global_parallel/restart.sbatch b/experiments/les_strats/global_parallel/restart.sbatch
@@ -6,7 +6,7 @@
 #SBATCH --mem-per-cpu=6G   # memory per CPU core
 #SBATCH -J "restart"   # job name
 
-module load julia/1.9.3 openmpi/4.1.5
+module load julia/1.10.0 openmpi/4.1.5
 
 output_dir=${1?Error: no output directory given}
 job_id=${2?Error: no job ID given}

diff --git a/experiments/les_strats/global_parallel/restart_ekp_par_calibration.sbatch b/experiments/les_strats/global_parallel/restart_ekp_par_calibration.sbatch
@@ -26,7 +26,7 @@ n_proc_scm=10
 echo "Restarting calibration with ${n} ensemble members and ${n_it} iterations (grand total)."
 
 module purge
-module load julia/1.9.3 openmpi/4.1.5
+module load julia/1.10.0 openmpi/4.1.5
 
 export JULIA_NUM_THREADS=${SLURM_CPUS_PER_TASK:=1}
 export JULIA_MPI_BINARY=system

diff --git a/experiments/les_strats/global_parallel/step_ekp.sbatch b/experiments/les_strats/global_parallel/step_ekp.sbatch
@@ -6,7 +6,7 @@
 #SBATCH --mem-per-cpu=6G   # memory per CPU core
 #SBATCH -J "sct_cont"   # job name
 
-module load julia/1.9.3 openmpi/4.1.5
+module load julia/1.10.0 openmpi/4.1.5
 iteration_=${1?Error: no iteration given}
 job_id=${2?Error: no job ID given}
 job_dir=$(head $job_id".txt" | tail -1)

diff --git a/experiments/les_strats/global_parallel/sysimage.sbatch b/experiments/les_strats/global_parallel/sysimage.sbatch
@@ -6,7 +6,7 @@
 #SBATCH --mem-per-cpu=20G   # memory per CPU core
 #SBATCH -J "sys_im"   # job name
 
-module load julia/1.9.3 openmpi/4.1.5
+module load julia/1.10.0 openmpi/4.1.5
 
 julia --project -C skylake-avx512 create_tc_so.jl
 

diff --git a/experiments/optimal_design/SCT_run.sbatch b/experiments/optimal_design/SCT_run.sbatch
@@ -6,7 +6,7 @@
 #SBATCH --mem-per-cpu=6G   # memory per CPU core
 #SBATCH -J "hadgem"   # job name
 
-module load julia/1.9.3 openmpi/4.1.5
+module load julia/1.10.0 openmpi/4.1.5
 
 julia --project -e 'using Pkg; Pkg.instantiate(); Pkg.API.precompile()'
 

diff --git a/experiments/optimal_design/global_parallel/ekp_par_calibration.sbatch b/experiments/optimal_design/global_parallel/ekp_par_calibration.sbatch
@@ -19,7 +19,7 @@ n_proc_scm=10
 echo "Initializing calibration with ${n} ensemble members and ${n_it} iterations."
 
 module purge
-module load julia/1.9.3 openmpi/4.1.5
+module load julia/1.10.0 openmpi/4.1.5
 
 export JULIA_NUM_THREADS=${SLURM_CPUS_PER_TASK:=1}
 export JULIA_MPI_BINARY=system

diff --git a/experiments/optimal_design/global_parallel/init.sbatch b/experiments/optimal_design/global_parallel/init.sbatch
@@ -7,7 +7,7 @@
 #SBATCH -J "sct_init"   # job name
 
 #julia package management
-module load julia/1.9.3 openmpi/4.1.5
+module load julia/1.10.0 openmpi/4.1.5
 
 config=${1?Error: no config file given}
 job_id=${2?Error: no job ID given}

diff --git a/experiments/optimal_design/global_parallel/parallel_scm_eval.sbatch b/experiments/optimal_design/global_parallel/parallel_scm_eval.sbatch
@@ -5,7 +5,7 @@
 #SBATCH --mem-per-cpu=6G   # memory per CPU core
 #SBATCH -J "sct_run"   # job name
 
-module load julia/1.9.3 openmpi/4.1.5
+module load julia/1.10.0 openmpi/4.1.5
 iteration_=${1?Error: no iteration given}
 job_id=${2?Error: no job ID given}
 n_proc_scm=${3?Error: number of processes not given}