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SolutionArray/HDF interface for 1D FlameBase #805

Merged
merged 29 commits into from
Mar 29, 2020
Merged

SolutionArray/HDF interface for 1D FlameBase #805

merged 29 commits into from
Mar 29, 2020

Commits on Mar 26, 2020

  1. [1D] Return FlameBase solution vector as SolutionArray 

    Retrieve information that describes the current solution state, including grid
point locations, normal velocity and tangential velocity gradient.
    @ischoegl
    ischoegl committed Mar 26, 2020
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  2. [1D] Restore FlameBase solution vector from SolutionArray

    @ischoegl
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  3. [Thermo] Fix restoration of extra columns in SolutionArray import 

    The previous implementation excluded column labels that were distinct from
reserved Cantera names if only a part matched. As some reserved Cantera names
have single letters, many valid column names were excluded.
    @ischoegl
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  4. [1D] Implement pandas/HDF input/output for FlameBase objects 

    The new pandas and HDF interfaces use Cantera's SolutionArray framework.
    @ischoegl
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  5. [1D] Differentiate SolutionArray IO for FlameBase-derived classes 

    Omit unused entries (e.g. 'lambda', 'eField') for 1D objects that do not use
them. Further, simplify/adjust nomenclature:
 * component 'u' is exported as 'velocity' ('u' clashes with thermo property)
 * component 'V' is exported as 'gradient' (short for velocity gradient)
 * components 'lambda' and 'eField' are exported with original names
    @ischoegl
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  6. [1D] Add unit tests for SolutionArray interface

    @ischoegl
    ischoegl committed Mar 26, 2020
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  7. [1D] Implement restart for FreeFlame

    @ischoegl
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  8. [1D] Improve docstrings and minor edits

    @ischoegl
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  9. [1D] Restore boundaries from SolutionArray

    @ischoegl
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  10. [1D] Enable mass fraction export to pandas/HDF

    @ischoegl
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  11. [1D] Enable saving of simulation settings to HDF

    @ischoegl
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  12. [1D] Add missing getters for radiation-enabled simulations

    @ischoegl
    ischoegl committed Mar 26, 2020
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  13. [1D] Enable output of fixed temperature settings for FreeFlame

    @ischoegl
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  14. [1D] Add time stamp to HDF output

    @ischoegl
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  15. [1D] Deprecate component name 'u' in favor of 'velocity'

    @ischoegl
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  16. [1D] Add unit test for simulation settings output

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  17. [1D] Deprecate component name 'V' in favor of 'vGradient'

    @ischoegl
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  18. [1D] Improve test coverage and minor fixes

    @ischoegl
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  19. [1D] Implement setter for simulation settings

    @ischoegl
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  20. [1D] Restore simulation settings from HDF

    @ischoegl
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  21. [Examples] Add optional HDF output to adiabatic_flame.py

    @ischoegl
    ischoegl committed Mar 26, 2020
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  22. [1D] Address review comments for FlameBase SolutionArray interface

    @ischoegl
    ischoegl committed Mar 26, 2020
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  23. [1D] Clarify V replacement as spread_rate 

    Replace the previous alternatives (tangential_velocity_gradient/vGradient) by
a single property name (spread_rate).
    @ischoegl
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  24. [1D] Make flow type accessible from Python

    @ischoegl
    ischoegl committed Mar 26, 2020
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  25. [1D] Streamline approach for restarting simulations from existing data 

    * Add ability to restart from existing data to remaining FlameBase
  derived objects.
* Add logic to prevent multiple solution attempts for auto solver when
  restart data is provided.
    @ischoegl
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  26. [1D] Add unit tests for remaining restart cases

    @ischoegl
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Commits on Mar 27, 2020

  1. [Thermo] Fix newline in SolutionArray.write_csv 

    Prevent extra (i.e. double) newline in CSV output on Windows.
    @ischoegl
    ischoegl committed Mar 27, 2020
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  2. [1D] Write CSV output using SolutionArray.write_csv

    @ischoegl
    ischoegl committed Mar 27, 2020
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Commits on Mar 29, 2020

  1. [1D] Address review comments

    @ischoegl
    ischoegl committed Mar 29, 2020
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