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I think something like this (like samtools, kallisto etc
salmon v0.6.0 - description here
Usage: salmon <COMMAND> [-h | options]
Commands:
index Create a salmon index
quant Count blah
swim Whatever
would be much clearer than the current help
salmon --help
Allowed Options:
-v [ --version ] print version string
--no-version-check don't check with the server to see if this is the
latest version
-h [ --help ] produce help message
Salmon v0.6.0
===============
Please invoke salmon with one of the following commands {index, quant, swim}.
For more information on the options for these particular methods, use the -h
flag along with the method name. For example:
salmon index -h
will give you detailed help information about the index command.
The text was updated successfully, but these errors were encountered:
I think something like this (like samtools, kallisto etc
would be much clearer than the current help
The text was updated successfully, but these errors were encountered: