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* updating paths for local nrlssc builds * Add jra55do forcing option * Updated env.nrlssc_gnu for new local directory structure * Added JRA55do to file names. Added comments for each variable name at top of JRA55do_???_files subroutine * Make JRA55 forcing to use common subroutines. Search atm_data_type for specific cases * remove extraneous 'i' variable in JRA55_files * Changed JRA55 filename JRA55_grid instead of grid at end of filename * Add jra55do tests to base_suite and quick_suite. This is done via set_nml options. * Update forcing implementation to provide a little more flexibility for JRA55, JRA55do, and ncar bulk atm forcing files. * Update documentation * update Onyx port * Update forcing documentation Initial port to derecho_intel * clean up blank spaces --------- Co-authored-by: daveh150 <david.hebert@nrlssc.navy.mil>
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,69 @@ | ||
| #============================================================================== | ||
| # Makefile macros for NCAR cheyenne, intel compiler | ||
| #============================================================================== | ||
|
|
||
| CPP := fpp | ||
| CPPDEFS := -DFORTRANUNDERSCORE ${ICE_CPPDEFS} | ||
| CFLAGS := -c -O2 -fp-model precise -march=core-avx2 | ||
|
|
||
| FIXEDFLAGS := -fixed -132 | ||
| FREEFLAGS := -free | ||
| FFLAGS := -fp-model precise -convert big_endian -assume byterecl -ftz -traceback -march=core-avx2 | ||
| FFLAGS_NOOPT:= -O0 | ||
|
|
||
| ifeq ($(ICE_BLDDEBUG), true) | ||
| FFLAGS += -O0 -g -check uninit -check bounds -check pointers -fpe0 -check noarg_temp_created -link_mpi=dbg | ||
| # FFLAGS += -O0 -g -check all -fpe0 -ftrapuv -fp-model except -check noarg_temp_created -link_mpi=dbg -stand f08 | ||
| # FFLAGS += -O0 -g -check all -fpe0 -ftrapuv -fp-model except -check noarg_temp_created -init=snan,arrays -link_mpi=dbg | ||
| else | ||
| FFLAGS += -O2 | ||
| endif | ||
|
|
||
| SCC := icx | ||
| SFC := ifort | ||
| MPICC := mpicc | ||
| MPIFC := mpif90 | ||
|
|
||
| ifeq ($(ICE_COMMDIR), mpi) | ||
| FC := $(MPIFC) | ||
| CC := $(MPICC) | ||
| else | ||
| FC := $(SFC) | ||
| CC := $(SCC) | ||
| endif | ||
| LD:= $(FC) | ||
|
|
||
| NETCDF_PATH := $(NETCDF) | ||
|
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||
| #PIO_CONFIG_OPTS:= --enable-filesystem-hints=gpfs | ||
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| PNETCDF_PATH := $(PNETCDF) | ||
| #PNETCDF_PATH := /glade/u/apps/ch/opt/pio/2.2/mpt/2.15f/intel/17.0.1/lib | ||
|
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||
| INCLDIR := $(INCLDIR) | ||
|
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| LIB_NETCDF := $(NETCDF)/lib | ||
| #LIB_PNETCDF := $(PNETCDF_PATH)/lib | ||
| #LIB_MPI := $(IMPILIBDIR) | ||
|
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||
| #SLIBS := -L$(LIB_NETCDF) -lnetcdf -lnetcdff -L$(LIB_PNETCDF) -lpnetcdf -lgptl | ||
| SLIBS := -L$(LIB_NETCDF) -lnetcdf -lnetcdff | ||
|
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||
| ifeq ($(ICE_THREADED), true) | ||
| LDFLAGS += -qopenmp | ||
| CFLAGS += -qopenmp | ||
| FFLAGS += -qopenmp | ||
| endif | ||
|
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||
| #ifeq ($(ICE_IOTYPE), pio1) | ||
| # LIB_PIO := $(PIO_LIBDIR) | ||
| # SLIBS := $(SLIBS) -L$(LIB_PIO) -lpio | ||
| #endif | ||
|
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||
| ifeq ($(ICE_IOTYPE), pio2) | ||
| # CPPDEFS := $(CPPDEFS) -DGPTL | ||
| # LIB_PIO := $(PIO_LIBDIR) | ||
| # SLIBS := $(SLIBS) -L$(LIB_PIO) -lpiof -lpioc -lgptl | ||
| SLIBS := $(SLIBS) -lpiof -lpioc | ||
| endif | ||
|
|
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,70 @@ | ||
| #!/bin/csh -f | ||
|
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||
| set inp = "undefined" | ||
| if ($#argv == 1) then | ||
| set inp = $1 | ||
| endif | ||
|
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| if ("$inp" != "-nomodules") then | ||
|
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| source ${MODULESHOME}/init/csh | ||
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| module --force purge | ||
| module load ncarenv/23.06 | ||
| module load craype | ||
| module load intel/2023.0.0 | ||
| module load ncarcompilers | ||
| module load cray-mpich/8.1.25 | ||
| #module load hdf5/1.12.2 | ||
| module load netcdf-mpi/4.9.2 | ||
| module load cray-libsci/23.02.1.1 | ||
|
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||
| if ($?ICE_IOTYPE) then | ||
| if ($ICE_IOTYPE =~ pio*) then | ||
| module load parallel-netcdf/1.12.3 | ||
| if ($ICE_IOTYPE == "pio1") then | ||
| module load parallelio/1.10.1 | ||
| else | ||
| module load parallelio/2.6.0 | ||
| endif | ||
| endif | ||
| endif | ||
|
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||
| if ($?ICE_BFBTYPE) then | ||
| if ($ICE_BFBTYPE =~ qcchk*) then | ||
| module load conda | ||
| # conda env create -f ../../configuration/scripts/tests/qctest.yml | ||
| conda activate qctest | ||
| endif | ||
| endif | ||
|
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||
| # For perftools with mpiexec | ||
| # module load perftools-base | ||
| # module load perftools | ||
| #setenv PALS_TRANSFER FALSE | ||
|
|
||
| endif | ||
|
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||
| limit coredumpsize unlimited | ||
| limit stacksize unlimited | ||
| setenv PALS_QUIET TRUE | ||
|
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||
| # May be needed for OpenMP memory | ||
| setenv OMP_STACKSIZE 64M | ||
| # OMP runtime diagnostics | ||
| #setenv OMP_DISPLAY_ENV TRUE | ||
|
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||
| setenv ICE_MACHINE_MACHNAME derecho | ||
| setenv ICE_MACHINE_MACHINFO "HPE Cray EX Milan Slingshot 11" | ||
| setenv ICE_MACHINE_ENVNAME intel | ||
| setenv ICE_MACHINE_ENVINFO "ifort 2021.8.0 20221119, cray-mpich 2.25, netcdf-mpi4.9.2, pnetcdf1.12.3, pio2.6.0" | ||
| setenv ICE_MACHINE_MAKE gmake | ||
| setenv ICE_MACHINE_WKDIR /glade/derecho/scratch/$user/CICE_RUNS | ||
| setenv ICE_MACHINE_INPUTDATA /glade/p/cesm/pcwg_dev | ||
| setenv ICE_MACHINE_BASELINE /glade/derecho/scratch/$user/CICE_BASELINE | ||
| setenv ICE_MACHINE_SUBMIT "qsub" | ||
| setenv ICE_MACHINE_ACCT P00000000 | ||
| setenv ICE_MACHINE_QUEUE "main" | ||
| setenv ICE_MACHINE_TPNODE 128 | ||
| setenv ICE_MACHINE_BLDTHRDS 8 | ||
| setenv ICE_MACHINE_QSTAT "qstat " |
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,2 @@ | ||
| atm_data_format = 'nc' | ||
| atm_data_type = 'JRA55' |
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,2 @@ | ||
| atm_data_format = 'nc' | ||
| atm_data_type = 'JRA55do' |
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