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Added read_fort14.py #82

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96 changes: 96 additions & 0 deletions oceanmesh/read_fort14.py
Original file line number Diff line number Diff line change
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import numpy as np

def read_fort14(finame="fort.14", read_bou=False):
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"""
Reads an ADCIRC fort.14 mesh file.

Args:
finame (str): Name of the input file. Default is 'fort.14'.
read_bou (bool): If True, also reads the boundary data.

Returns:
tuple: EToV, VX, B, opedat, boudat, title
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"""
print("Reading fort.14 file")

with open(finame, 'r') as fid:
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# Leer la primera línea con el título
title = fid.readline().strip()
print(title)

# Leer el número de nodos y elementos
msgline = fid.readline().strip()
N = list(map(int, msgline.split()))

# Leer nodos (número, posición, profundidad)
Val = np.loadtxt(fid, max_rows=N[1], dtype=float)

# Leer triangulación
idx = np.loadtxt(fid, max_rows=N[0], dtype=int)

# Ordenar los datos leídos
EToV = idx[:, 2:5]
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Could be good to check that EToV is converted to zero-based indexing as that's how it's used in Python.

num_nodes = np.max(EToV)
VX = np.full((num_nodes, 2), np.nan)
B = np.full(num_nodes, np.nan)

VX[Val[:, 0].astype(int) - 1, :] = Val[:, 1:3]
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Could be good to check that all vertices are present in the element table.

B[Val[:, 0].astype(int) - 1] = Val[:, 3]

opedat = None
boudat = None

if read_bou:
# Leer frontera abierta
line_nope = fid.readline().strip()
nope = int(line_nope.split('=')[0].strip()) # Extraer el número antes del signo '='
print(nope)
line_neta = fid.readline().strip()
neta = int(line_neta.split('=')[0].strip()) # Extraer el número antes del signo '='
print(neta)

nvdll = np.zeros(nope, dtype=int)
ibtypee = np.zeros(nope, dtype=int)
nbdv = np.zeros((neta, nope), dtype=int)

for i in range(nope):
line = fid.readline().strip()
varg = int(line.split()[0])
nvdll[i] = varg
nbdv[:nvdll[i], i] = np.loadtxt(fid, max_rows=nvdll[i], dtype=int)

opedat = {
"nope": nope,
"neta": neta,
"nvdll": nvdll,
"ibtypee": ibtypee,
"nbdv": nbdv[:np.max(nvdll), :],
}

# Leer frontera terrestre
line_nbou = fid.readline().strip()
nbou = int(line_nbou.split('=')[0].strip()) # Extraer el número antes del signo '='
line_nvel = fid.readline().strip()
nvel = int(line_nvel.split('=')[0].strip()) # Extraer el número antes del signo '='

nvell = np.zeros(nbou, dtype=int)
ibtype = np.zeros(nbou, dtype=int)
nbvv = np.zeros((nvel, nbou), dtype=int)

for i in range(nbou):
line = fid.readline().strip()
varg = list(map(int, line.split()[:2]))
nvell[i], ibtype[i] = varg

if ibtype[i] in [0, 1, 2, 10, 11, 12, 20, 21, 22, 30, 60, 61, 101, 52]:
nbvv[:nvell[i], i] = np.loadtxt(fid, max_rows=nvell[i], dtype=int)

boudat = {
"nbou": nbou,
"nvel": nvel,
"nvell": nvell,
"ibtype": ibtype,
"nbvv": nbvv[:np.max(nvell), :],
}

return EToV, VX, B, opedat, boudat, title
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