feat: khmer/uniquekmers module w/ stubs #7

kelly-sovacool · 2023-10-10T16:16:53Z

Changes

Adapt khmer/uniquekmers from nf-core/modules. This version implements a stub.

(~~Strikethrough~~ any points that are not applicable.)

This comment contains a description of changes with justifications, with any relevant issues linked.
Write unit tests for any new features, bug fixes, or other code changes.
Update docs if there are any API changes.
Update CHANGELOG.md with a short description of any user-facing changes and reference the PR number. Guidelines: https://keepachangelog.com/en/1.1.0/

PROFILE=docker nf-core modules create-test-yml khmer/uniquekmers --run-tests --force --no-prompts

kelly-sovacool added 10 commits October 10, 2023 12:08

feat: khmer/uniquekmers module w/ stubs

cede72a

docs: link to original khmer module

aba489a

test: add khmer to tests/config/pytest_modules.yml

8a7ba9b

fix: repo name

aec48bb

fix: khmer needs quay.io registry

ed2a90f

fix: switch to ccbr custom container

3e6cc92

fix: stub output

b5b4ba5

test: update khmer tests

bfc80f7

PROFILE=docker nf-core modules create-test-yml khmer/uniquekmers --run-tests --force --no-prompts

fix: must specify exact module in config

6b92386

fix: khmer meta yaml - lint error from nf-core tools

89f8468

kelly-sovacool merged commit ae58d4f into main Oct 11, 2023
7 checks passed

kelly-sovacool deleted the khmer branch October 11, 2023 17:43