Error while running LDtrait

[vermaa1]

Hi,

I am getting an error with the LDtrait function.

mytrait<-LDtrait(snps = "rs334",
                 pop = c("YRI"),
                 r2d = "r2",
                 r2d_threshold = "0.1",
                 win_size = "500000",
                 token = "MY TOKEN"
                )

Error in LDtrait(snp = "rs334", pop = "YRI", r2d = "r2", token = "MY TOKEN") : 
  integer(0) integer(0) integer(0) integer(0) integer(0) numeric(0) numeric(0) integer(0) numeric(0) integer(0) numeric(0)

Thanks!

[timyers]

Thank you for reporting this issue. After investigating, I determined you helped uncover a bug that is triggered when the LDtrait response data from the API contains the GWAS trait "Refractive error". This caused a problem while coming up with the strategy for handling errors. I am working on a fix and will report it here when it's available. Thank you for your interest in LDlinkR.

[timyers]

The patch to fix this issue is now available on Github and will be included in the next version submitted to CRAN.
Thank you again for reporting this problem.

[vermaa1]

Thank you so much! It works now.