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Noise models for paper notebooks #285

Merged
merged 36 commits into from
Dec 3, 2024
Merged

Noise models for paper notebooks #285

merged 36 commits into from
Dec 3, 2024

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CatEek
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@CatEek CatEek commented Nov 29, 2024

Description

Small refac for submission notebooks. Training code works if called explicitly. Training inside careamics needs further engineering.
NM code needs refactoring

Changes Made

  • Added:
  • Basic training
  • plotting function

Please ensure your PR meets the following requirements:

  • [x ] Code builds and passes tests locally, including doctests
  • New tests have been added (for bug fixes/features)
  • [x ] Pre-commit passes
  • PR to the documentation exists (for bug fixes / features)

CatEek and others added 30 commits August 14, 2024 14:54
…changes in the GaussianLikelihoodConfig model
@@ -12,6 +13,67 @@
# TODO this module shouldn't be in lvae folder


def create_histogram(bins, min_val, max_val, observation, signal):
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No return annotation

src/careamics/models/lvae/noise_models.py Outdated Show resolved Hide resolved
@CatEek CatEek requested a review from jdeschamps December 2, 2024 10:32
@CatEek CatEek merged commit b4fa28f into main Dec 3, 2024
18 checks passed
@CatEek CatEek deleted the iz/feat/nm_training branch December 3, 2024 10:26
CatEek added a commit that referenced this pull request Dec 5, 2024
related to #285, missed commit

---------

Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>
Co-authored-by: federico-carrara <federico1.carrara@mail.polimi.it>
Co-authored-by: Joran Deschamps <6367888+jdeschamps@users.noreply.github.com>
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3 participants