Update pull.yml #331
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| # | |
| # See the NOTICE file distributed with this work for additional information | |
| # regarding copyright ownership. | |
| # | |
| # Licensed under the Apache License, Version 2.0 (the "License"); | |
| # you may not use this file except in compliance with the License. | |
| # You may obtain a copy of the License at | |
| # | |
| # http://www.apache.org/licenses/LICENSE-2.0 | |
| # | |
| # Unless required by applicable law or agreed to in writing, software | |
| # distributed under the License is distributed on an "AS IS" BASIS, | |
| # WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. | |
| # See the License for the specific language governing permissions and | |
| # limitations under the License. | |
| # | |
| name: breedbase build | |
| on: | |
| push: | |
| branches: | |
| - develop | |
| - master | |
| - release/** | |
| workflow_dispatch: | |
| jobs: | |
| version: | |
| if: github.actor != 'rob-ouser-bi' | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v2 | |
| with: | |
| persist-credentials: false | |
| fetch-depth: 0 | |
| - name: Get release version | |
| uses: actions-ecosystem/action-get-latest-tag@v1 | |
| id: get-latest-tag | |
| - name: Update version | |
| run: sed -i -E "s/^version .*/version ${{ steps.get-latest-tag.outputs.tag }}-$GITHUB_RUN_NUMBER/" sgn.conf | |
| - name: Update version info | |
| run: sed -i -E "s/^version_updated .*/version_updated ${{ github.event.repository.updated_at}}/" sgn.conf | |
| - name: Commit sgn.conf | |
| run: | | |
| git config --local user.email "bidevteam@cornell.edu" | |
| git config --local user.name "rob-ouser-bi" | |
| git add . | |
| git commit -m "[autocommit] bumping build number" | |
| - name: Push changes | |
| uses: ad-m/github-push-action@v0.6.0 | |
| with: | |
| github_token: ${{ secrets.ROB_OUSER_TOKEN }} | |
| branch: ${{ github.ref }} | |
| force: true | |
| build: | |
| needs: version | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Free up space | |
| run: | | |
| sudo rm -rf /usr/share/dotnet | |
| sudo rm -rf /opt/ghc | |
| sudo rm -rf "/usr/local/share/boost" | |
| sudo rm -rf "$AGENT_TOOLSDIRECTORY" | |
| - name: Login to Docker Hub | |
| uses: docker/login-action@v1 | |
| with: | |
| username: ${{ secrets.DOCKERHUB_USERNAME }} | |
| password: ${{ secrets.DOCKERHUB_PASSWORD }} | |
| - name: Get the sgn repo | |
| uses: actions/checkout@v2 | |
| # - name: Get release version | |
| # uses: actions-ecosystem/action-get-latest-tag@v1 | |
| # id: get-latest-tag | |
| - name: Extract branch name | |
| shell: bash | |
| run: echo ::set-output name=branch::$(echo ${GITHUB_REF#refs/heads/}) | |
| id: extract_branch | |
| - name: Get breedbase_dockerfile | |
| if: steps.extract_branch.outputs.branch == 'develop' | |
| uses: actions/checkout@master | |
| with: | |
| repository: Breeding-Insight/breedbase_dockerfile | |
| path: breedbase_dockerfile | |
| ref: 'develop' | |
| submodules: 'recursive' | |
| - name: Get breedbase_dockerfile | |
| if: startsWith(steps.extract_branch.outputs.branch, 'release/') | |
| uses: actions/checkout@master | |
| with: | |
| repository: Breeding-Insight/breedbase_dockerfile | |
| path: breedbase_dockerfile | |
| ref: ${{ steps.extract_branch.outputs.branch }} | |
| submodules: 'recursive' | |
| - name: Get breedbase_dockerfile | |
| if: steps.extract_branch.outputs.branch == 'master' | |
| uses: actions/checkout@master | |
| with: | |
| repository: Breeding-Insight/breedbase_dockerfile | |
| path: breedbase_dockerfile | |
| ref: 'master' | |
| submodules: 'recursive' | |
| - name: Get the submodules | |
| working-directory: ./breedbase_dockerfile | |
| run: git submodule update --init --recursive | |
| - name: Set sgn origin | |
| working-directory: ./breedbase_dockerfile/cxgn/sgn | |
| run: | | |
| git remote rm origin | |
| git remote add origin git@github.com:Breeding-Insight/sgn.git | |
| git remote update | |
| - name: Checkout sgn branch | |
| working-directory: ./breedbase_dockerfile/cxgn/sgn | |
| run: | | |
| git checkout -B ${{ steps.extract_branch.outputs.branch }} origin/${{ steps.extract_branch.outputs.branch }} | |
| - name: Debug sgn branch | |
| working-directory: ./breedbase_dockerfile/cxgn/sgn | |
| run: git status | |
| - name: Set tag | |
| id: vars | |
| run: echo ::set-output name=imageName::$(echo breedinginsight/breedbase:$(sed -nE "s/^version (.*)/\1/p" sgn.conf)) | |
| - name: Build Docker and push image | |
| working-directory: ./breedbase_dockerfile | |
| run: | | |
| docker build . --file Dockerfile --tag ${{steps.vars.outputs.imageName}} | |
| docker push ${{steps.vars.outputs.imageName}} | |
| - name: Tag develop | |
| if: steps.extract_branch.outputs.branch == 'develop' | |
| run: | | |
| docker tag ${{steps.vars.outputs.imageName}} breedinginsight/breedbase:develop | |
| docker push breedinginsight/breedbase:develop | |
| - name: Tag master | |
| if: steps.extract_branch.outputs.branch == 'master' | |
| run: | | |
| docker tag ${{steps.vars.outputs.imageName}} breedinginsight/breedbase:latest | |
| docker push breedinginsight/breedbase:latest | |
| - name: Tag release | |
| if: contains(github.ref, '/release/') | |
| run: | | |
| docker tag ${{steps.vars.outputs.imageName}} breedinginsight/breedbase:rc | |
| docker push breedinginsight/breedbase:rc |