Use spack modules

BlueBrain · May 31, 2024 · a542511 · a542511
1 parent 2055de5
commit a542511
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Showing 4 changed files with 16 additions and 8 deletions.
diff --git a/src/blue_cwl/generators/memodel/neurons_memodel/v3/emodel_adapt.cwl b/src/blue_cwl/generators/memodel/neurons_memodel/v3/emodel_adapt.cwl
@@ -5,8 +5,10 @@ id: emodel_adapt
 label: emodel-adapt
 
 environment:
-  env_type: VENV
-  path: /gpfs/bbp.cscs.ch/project/proj134/scratch/zisis/sub-workflows/venv311
+  env_type: MODULE
+  modules:
+    - unstable
+    - py-emodel-generalisation
 
 executor:
   type: slurm

diff --git a/src/blue_cwl/generators/memodel/neurons_memodel/v3/emodel_assign.cwl b/src/blue_cwl/generators/memodel/neurons_memodel/v3/emodel_assign.cwl
@@ -5,8 +5,10 @@ id: emodel_assign
 label: emodel-assign
 
 environment:
-  env_type: VENV
-  path: /gpfs/bbp.cscs.ch/project/proj134/scratch/zisis/sub-workflows/venv311
+  env_type: MODULE
+  modules:
+    - unstable
+    - py-emodel-generalisation
 
 executor:
   type: slurm

diff --git a/src/blue_cwl/generators/memodel/neurons_memodel/v3/emodel_currents.cwl b/src/blue_cwl/generators/memodel/neurons_memodel/v3/emodel_currents.cwl
@@ -5,8 +5,10 @@ id: emodel_currents
 label: emodel-currents
 
 environment:
-  env_type: VENV
-  path: /gpfs/bbp.cscs.ch/project/proj134/scratch/zisis/sub-workflows/venv311
+  env_type: MODULE
+  modules:
+    - unstable
+    - py-emodel-generalisation
 
 executor:
   type: slurm

diff --git a/src/blue_cwl/generators/memodel/neurons_memodel/v3/emodel_prepare.cwl b/src/blue_cwl/generators/memodel/neurons_memodel/v3/emodel_prepare.cwl
@@ -5,8 +5,10 @@ id: emodel_prepare
 label: emodel-prepare
 
 environment:
-  env_type: VENV
-  path: /gpfs/bbp.cscs.ch/project/proj134/scratch/zisis/sub-workflows/venv311
+  env_type: MODULE
+  modules:
+    - unstable
+    - py-emodel-generalisation
 
 executor:
   type: slurm