Add valid bio example

examples/synthesize_neuron.py

@@ -0,0 +1,33 @@
+import tns
+import tmd
+import view
+
+# Select output_path to save results
+output_path = './Results/'
+# Select a name for the synthesized neuron
+output_name = 'TestNeuron'
+
+# Extract distributions from cells in input directory
+filename = './test_data/bio/'
+distr = tns.extract_input.distributions(filename, diameter_model=True)
+
+# Generate default parameters dictionary
+params = tns.extract_input.parameters(neurite_types=['basal', 'apical'])
+
+# Initialize a neuron
+N = tns.Grower(input_distributions=distr, input_parameters=params, name=output_name)
+
+# Grow your neuron
+N.grow()
+
+# Correct the diameters of your neuron
+N.diametrize()
+
+# Save your neuron to the selected output path
+N.save(output_path=output_path)
+
+# Load the generated neuron
+n = tmd.io.load_neuron(output_path + output_name + '.h5'
+
+# View your generated neuron
+view.view.neuron(n)