Use a hybrid conda+uv installation

docs/installation.md

@@ -8,52 +8,30 @@ First, create a new conda environment:
 conda create -n napari-lattice -c conda-forge 'python==3.11.*' uv pycudadecon
 ```
 
-Then use `uv` to quickly install the Napari Lattice suite:
-
-```bash
-uv pip install lls-core napari-lattice napari-aicsimageio pyqt5
-```
-
-## Faster Installation using `uv`
-
-Installing both `lls-core` and `napari-lattice` takes about 10 minutes using a fast internet connection.
-If your connection is slow, or you just don't want to wait this long, you can install it in about 10 seconds using `uv`:
-
-1. Install `uv` following [the instructions here](https://docs.astral.sh/uv/getting-started/installation/)
-2. Create a new project using `uv init my-project`
-3. `uv add lls-core napari-lattice`
-
-## Recommended Plugins
+!!! info
+    We include `pycudadecon` to enable GPU accelerated deconvolution.
 
-If you are working with `.czi` files, it is recommended that you install the [`napari-aicsimageio`](https://github.com/AllenCellModeling/napari-aicsimageio) plugin for Napari.
-`napari-lattice` does not depend on this plugin, so you will have to install it separately, either using the Napari plugin manager, or using `pip install napari-aicsimageio`.
-
-## CUDA Deconvolution
-
-If you have access to a CUDA-compatible GPU, you can enable deconvolution using `pycudadecon`.
-
-If you're using conda (or micromamba etc), you can run the following:
+Activate that environment:
 
 ```bash
-conda install -c conda-forge pycudadecon
+conda activate napari-lattice
 ```
 
-Otherwise, you will have to manually ensure the systems dependencies are installed, and then:
+Then use `uv` to quickly install the Napari Lattice suite:
 
 ```bash
-pip install lls-core[deconvolution]
+uv pip install lls-core napari-lattice napari-aicsimageio pyqt5
 ```
 
-## Development Versions
-
-To install the development version of `lls-core`:
+!!! info
+    `napari-aicsimageio` isn't a dependency of the Lattice suite, but is required for loading the `.czi` files generated by the Lightsheet
 
-```bash
-pip install git+https://github.com/BioimageAnalysisCoreWEHI/napari_lattice.git#subdirectory=core
-```
+## Development Installation
 
-For `napari-lattice`:
+To install the development version of `lls-core`, create the `napari-lattice` environment as above, but instead of installing from pip in the last step:
 
 ```bash
-pip install git+https://github.com/BioimageAnalysisCoreWEHI/napari_lattice.git#subdirectory=plugin
+git clone https://github.com/BioimageAnalysisCoreWEHI/napari_lattice.git
+cd napari_lattice
+uv pip install -e core -e plugin napari-aicsimageio pyqt5
 ```