Skip to content
@BigDataBiology

Big Data Biology Lab

Pinned Loading

  1. macrel macrel Public

    Predict AMPs in (meta)genomes and peptides

    Python 78 13

  2. SemiBin SemiBin Public

    SemiBin: metagenomics binning with self-supervised deep learning

    Python 131 12

  3. GMGC-mapper GMGC-mapper Public

    Python 6 7

  4. fasta_reader fasta_reader Public

    Python 1 1

  5. argNorm argNorm Public

    ARG normalization by mapping to the ARO ontology.

    Python 47 6

  6. sardyne sardyne Public

    Python 5 2

Repositories

Showing 10 of 36 repositories
  • magsview Public
    BigDataBiology/magsview’s past year of commit activity
    Elm 0 MIT 1 0 0 Updated Apr 23, 2025
  • argNorm Public

    ARG normalization by mapping to the ARO ontology.

    BigDataBiology/argNorm’s past year of commit activity
    Python 47 MIT 6 1 0 Updated Apr 20, 2025
  • big-data-biology_org Public
    BigDataBiology/big-data-biology_org’s past year of commit activity
    Elm 0 16 0 4 Updated Apr 20, 2025
  • ENA_microbial_submission Public Forked from B-UMMI/ENA_microbial_submission

    Set of scripts and instructions to upload sequencing reads to the ENA.

    BigDataBiology/ENA_microbial_submission’s past year of commit activity
    Python 0 GPL-3.0 1 0 0 Updated Apr 17, 2025
  • sardyne Public
    BigDataBiology/sardyne’s past year of commit activity
    Python 5 MIT 2 0 0 Updated Apr 8, 2025
  • SemiBin Public

    SemiBin: metagenomics binning with self-supervised deep learning

    BigDataBiology/SemiBin’s past year of commit activity
    Python 131 12 18 1 Updated Mar 21, 2025
  • VideoTutorials Public

    Supporting material for YouTube tutorials

    BigDataBiology/VideoTutorials’s past year of commit activity
    Python 1 1 0 0 Updated Mar 17, 2025
  • argNorm_benchmark Public

    Benchmark repo for argNorm

    BigDataBiology/argNorm_benchmark’s past year of commit activity
    Python 2 2 0 2 Updated Mar 5, 2025
  • macrel Public

    Predict AMPs in (meta)genomes and peptides

    BigDataBiology/macrel’s past year of commit activity
    Python 78 13 2 0 Updated Jan 23, 2025
  • SantosJunior_Torres_2024_AMPSphere_v1 Public

    Figures and files used in the AMPSphere manuscript

    BigDataBiology/SantosJunior_Torres_2024_AMPSphere_v1’s past year of commit activity
    Python 4 MIT 2 0 0 Updated Jan 2, 2025
View all repositories

Top languages

Loading…

Most used topics

Loading…