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Tests

Fix tests for codecov. #9

	name: Tests
	on:
	push:
	branches:
	- master
	pull_request:

	jobs:
	codecov:
	name: Code coverage on codecov
	runs-on: "ubuntu-latest"
	defaults:
	run:
	shell: bash -l {0}
	steps:
	- uses: actions/checkout@v4
	with:
	fetch-depth: 0
	- name: Install requirements
	uses: mamba-org/setup-micromamba@v1
	with:
	environment-file: environment.yml
	cache-environment-key: pylatest-ubuntu-latest-mamba-${{ env.CACHE_NUMBER }}-${{ hashFiles('environment.yml') }}
	cache-downloads: false
	- name: Python version
	run: python --version
	- name: Test for Coverage
	# xvfb for graphical interface
	run: xvfb-run -a pytest --cov
	- name: Upload coverage to Codecov
	uses: codecov/codecov-action@v4
	with:
	token: ${{ secrets.CODECOV_TOKEN }}
	directory: ./coverage/reports/
	# env_vars: OS,PYTHON
	fail_ci_if_error: true
	files: ./coverage.xml,!./cache
	flags: unittests
	name: codecov-umbrella
	verbose: true

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