Skip to content

Issues: BGI-Qingdao/TGS-GapCloser

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

12 Open 73 Closed
12 Open 73 Closed
Author
Filter by author
Loading
Label
Filter by label
Loading
Use alt + click/return to exclude labels
or ⇧ + click/return for logical OR
Projects
Filter by project
Loading
Milestones
Filter by milestone
Loading
Assignee
Filter by who’s assigned
Sort
Sort by
Newest Oldest Most commented Least commented Recently updated Least recently updated Best match
Most reactions
👍 👎 😄 🎉 😕 ❤️ 🚀 👀

Issues list

Inquiry about "tgsgapcloser: line 645: 47805 Killed"
#92 opened Feb 4, 2025 by woojunbang
tgsgapcloser: line 443: 16656 Segmentation fault (core dumped) $MiniMap2 $MINIMAP2_PARAM -t $THREAD $TGS_READS $TMP_INPUT_SCAFTIG > $OUT_PREFIX.sub.paf 2> $OUT_PREFIX.minimap2.01.log
#91 opened Jan 10, 2025 by Alipha-Clisa
Confusion about QS calculation
#89 opened Oct 30, 2024 by shiyi-pan
`GLIBCXX_3.4.20' not found
#88 opened Oct 11, 2024 by zhenzhenyang-psu
1
Using different reads to fill the gap in genome
#87 opened Sep 21, 2024 by DayTimeMouse
tgsgapcloser: line 628: 1268093 Segmentation fault (core dumped)
#86 opened Sep 2, 2024 by yuan102379
3
Use pre-assembled contigs for gap filling
#85 opened Aug 16, 2024 by chenzixi07
1
/home/hjn/anaconda3/envs/genome/bin/tgsgapcloser: line 443: 115644 Killed
#84 opened May 30, 2024 by Hanjiangna
2
scaffold become truncated after TGSGapCandidate
#81 opened Apr 9, 2024 by smallfishcui
1
error: empty target sequences set!
#80 opened Mar 27, 2024 by Marison-1
2
error with racon
#79 opened Mar 20, 2024 by zhengyanstu
1
Why not output to folder? enhancement New feature or request
#78 opened Mar 18, 2024 by Isoris
ProTip! Type g i on any issue or pull request to go back to the issue listing page.