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@BGDlab

BGDlab

The Brain-Gene-Development Lab at UPenn/CHOP
README.md

The CHOP/Penn Brain-Gene-Development Lab integrates multimodal neuroimaging and genomics data with deep phenotyping of individuals within the Children's Hospital of Philadelphia and University of Pennsylvania systems. Our goal is to translate the highly polygenic risk for psychosis and other neurovelopmental psychiatric disorders into pathophysiologic mechanisms, to inform the development of new treatments for individuals with mental illness.

webpage: https://www.bgdlab.org/

wiki: https://bgdlab.github.io/

Popular repositories Loading

  1. cnv-study cnv-study Public

    Forked from huffnag/cnv-study

    Code for Alexander-Bloch et al JAMA Psychiatry (2022) PMID 35544191

    R 1

  2. combat-biovar combat-biovar Public

    R 1

  3. PFNs_ABCD PFNs_ABCD Public

    This contains scripts for a study in ABCD relating personalized funcitonal networks (PFNs) to p-factor, PRS-F1, and PRS-F2. Also includes scripts related to heritabiltiy of PFNs and p-factor.

    R 1

  4. spin-test spin-test Public

    Forked from spin-test/spin-test

    Code for "On testing for spatial correspondence between maps of human brain structure and function," Alexander-Bloch et al., NeuroImage, 2018.

    MATLAB

  5. brain-networks brain-networks Public

    Forked from aaronab/brain-networks

    Code for Alexander-Bloch et al Frontiers in Systems Neuroscience (2010) PMID 21031030; NeuroImage (2012) PMID 22119652

    R

  6. local_correlation local_correlation Public

    Forked from aaronab/local_correlation

    Code for "Imaging local genetic influences on cortical folding", Alexander-Bloch et al, PNAS, 2020

    MATLAB

Repositories

Showing 10 of 20 repositories
  • gamlssTools Public

    Auxiliary functions for plotting and interacting with gamlss models

    BGDlab/gamlssTools’s past year of commit activity
    R 0 CC-BY-4.0 1 10 0 Updated Apr 3, 2025
  • annotation-helper-tools Public
    BGDlab/annotation-helper-tools’s past year of commit activity
    Jupyter Notebook 0 1 2 (1 issue needs help) 1 Updated Mar 31, 2025
  • PFNs_ABCD Public

    This contains scripts for a study in ABCD relating personalized funcitonal networks (PFNs) to p-factor, PRS-F1, and PRS-F2. Also includes scripts related to heritabiltiy of PFNs and p-factor.

    BGDlab/PFNs_ABCD’s past year of commit activity
    R 1 0 0 0 Updated Mar 26, 2025
  • Locutus Public
    BGDlab/Locutus’s past year of commit activity
    0 0 0 0 Updated Feb 19, 2025
  • recon-all-clinical-workflow Public
    BGDlab/recon-all-clinical-workflow’s past year of commit activity
    Python 0 0 0 0 Updated Feb 18, 2025
  • combat-biovar Public
    BGDlab/combat-biovar’s past year of commit activity
    R 1 0 0 0 Updated Feb 2, 2025
  • Ray_rotation_2024_16p11.2CNV_Imaging_Transcriptomics Public
    BGDlab/Ray_rotation_2024_16p11.2CNV_Imaging_Transcriptomics’s past year of commit activity
    HTML 0 0 0 0 Updated Nov 1, 2024
  • manual_smri_qc Public
    BGDlab/manual_smri_qc’s past year of commit activity
    Python 0 1 2 (1 issue needs help) 0 Updated Oct 8, 2024
  • BGDlab.github.io Public
    BGDlab/BGDlab.github.io’s past year of commit activity
    0 0 1 1 Updated Oct 1, 2024
  • ggsegTissue Public
    BGDlab/ggsegTissue’s past year of commit activity
    R 0 CC-BY-4.0 1 1 0 Updated Sep 4, 2024
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