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Expose mask correction and geometry tolerance to the pyradiomics-dcm CLI #724

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merged 4 commits into from
Oct 1, 2021
Merged

Expose mask correction and geometry tolerance to the pyradiomics-dcm CLI #724

merged 4 commits into from
Oct 1, 2021

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piiq
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@piiq piiq commented Sep 30, 2021

This PR exposes geometryTrolerance and correctMask extractor settings to the CLI of pyradiomics-dcm making it possible to process to process images that raise an 'Image/Mask geometry mismatch' error.

The default parameters are the same as the default parameters in sitk and pyradiomics:

  • geometryTolerance is 1e-6
  • correctMask is False
  • Update documentation
  • Update Changelog for the next release

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piiq commented Sep 30, 2021

@fedorov could you have a look at this, please?

@fedorov fedorov merged commit dfe2c14 into AIM-Harvard:master Oct 1, 2021
@piiq piiq deleted the feature/dcm-mask-correction branch October 1, 2021 05:10
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@fedorov fedorov fedorov approved these changes

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