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implement the “winner take all” model for containment search? #8

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zheminzhou opened this issue Jun 11, 2021 · 0 comments
Open

implement the “winner take all” model for containment search? #8

zheminzhou opened this issue Jun 11, 2021 · 0 comments

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@zheminzhou
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Hi

I am implementing kssd as a solution for rapid taxonomic identification for metagenomic data. The performance is impressive. However, the top hits from the containment search are all from the same species. sourmash implemented a "winner take all" model in its gather function, which is quite useful for finding multiple species co-exists in the same metagenome. Is it possible to implement this model in kssd as well?

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Zhemin
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