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automate running of qsubs with dependencies on SGE #6

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xguse opened this issue May 22, 2013 · 0 comments
Open

automate running of qsubs with dependencies on SGE #6

xguse opened this issue May 22, 2013 · 0 comments
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@xguse
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xguse commented May 22, 2013

as of now:

blacktie --prog all config.yaml --mode qsub_script

writes your individual qsub scripts but you have to submit them all by hand.

blacktie should be able to write a meta-qsub that will take care of submitting, monitoring successfull completion of dependent runs and progression to the next set of qsubs.

@ghost ghost assigned xguse Jul 2, 2013
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