{"payload":{"feedbackUrl":"https://github.com/orgs/community/discussions/53140","repo":{"id":629241319,"defaultBranch":"main","name":"RoseTTAFold2","ownerLogin":"uw-ipd","currentUserCanPush":false,"isFork":false,"isEmpty":false,"createdAt":"2023-04-17T23:23:36.000Z","ownerAvatar":"https://avatars.githubusercontent.com/u/39229126?v=4","public":true,"private":false,"isOrgOwned":true},"refInfo":{"name":"","listCacheKey":"v0:1724196575.0","currentOid":""},"activityList":{"items":[{"before":"d9f86d81b57acc36b50e9961dc9aa704fb180e29","after":"76342a00fa85e54c4754d62874a76f976d6a2926","ref":"refs/heads/cyclic_peptides","pushedAt":"2024-08-21T19:46:56.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"fdimaio","name":"Frank DiMaio","path":"/fdimaio","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3934443?s=80&v=4"},"commit":{"message":"Final updates for cyclic prediction","shortMessageHtmlLink":"Final updates for cyclic prediction"}},{"before":"e78b6ed7bb460e0a7007ac806e0ed8f51d23d634","after":"d9f86d81b57acc36b50e9961dc9aa704fb180e29","ref":"refs/heads/cyclic_peptides","pushedAt":"2024-08-21T18:03:21.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"fdimaio","name":"Frank DiMaio","path":"/fdimaio","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3934443?s=80&v=4"},"commit":{"message":"Missing a few functions","shortMessageHtmlLink":"Missing a few functions"}},{"before":null,"after":"e78b6ed7bb460e0a7007ac806e0ed8f51d23d634","ref":"refs/heads/cyclic_peptides","pushedAt":"2024-08-20T23:29:35.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"fdimaio","name":"Frank DiMaio","path":"/fdimaio","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3934443?s=80&v=4"},"commit":{"message":"Checkin code for cyclic peptide validation.","shortMessageHtmlLink":"Checkin code for cyclic peptide validation."}},{"before":"207d9014cefeacc6e45afe8783f367829c1f509e","after":"e9ca6e0c42a36848c4ef9006ccbfcc976b5265a6","ref":"refs/heads/density","pushedAt":"2024-07-25T14:47:32.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"fdimaio","name":"Frank DiMaio","path":"/fdimaio","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3934443?s=80&v=4"},"commit":{"message":"A few updates","shortMessageHtmlLink":"A few updates"}},{"before":"fef579cd37d1cbc082802a34394f41ee072326b3","after":"278f4eaad5d81b81b86f41126051ca01677b238b","ref":"refs/heads/main","pushedAt":"2024-05-16T21:09:30.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"fdimaio","name":"Frank DiMaio","path":"/fdimaio","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3934443?s=80&v=4"},"commit":{"message":"Update README.md","shortMessageHtmlLink":"Update README.md"}},{"before":"afded65d041ee584c5ff01a5c48a361d0ae923a3","after":null,"ref":"refs/heads/fix_training","pushedAt":"2024-05-16T21:08:43.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"fdimaio","name":"Frank DiMaio","path":"/fdimaio","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3934443?s=80&v=4"}},{"before":"a26f29bb92d4946ef8bf225edba9240c9e647747","after":"fef579cd37d1cbc082802a34394f41ee072326b3","ref":"refs/heads/main","pushedAt":"2024-05-16T21:08:40.000Z","pushType":"pr_merge","commitsCount":6,"pusher":{"login":"fdimaio","name":"Frank DiMaio","path":"/fdimaio","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3934443?s=80&v=4"},"commit":{"message":"Merge pull request #36 from uw-ipd/fix_training\n\nFix training","shortMessageHtmlLink":"Merge pull request #36 from uw-ipd/fix_training"}},{"before":"3fae916bbe9f1f4b0ea899dc31204201343c96bb","after":"afded65d041ee584c5ff01a5c48a361d0ae923a3","ref":"refs/heads/fix_training","pushedAt":"2024-05-16T21:07:12.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"fdimaio","name":"Frank DiMaio","path":"/fdimaio","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3934443?s=80&v=4"},"commit":{"message":"Add option for cyclics","shortMessageHtmlLink":"Add option for cyclics"}},{"before":"865621fff2d247ba433bda549a798197a1bfb822","after":null,"ref":"refs/heads/dimaio/updated_training","pushedAt":"2024-05-10T23:55:55.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"fdimaio","name":"Frank DiMaio","path":"/fdimaio","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3934443?s=80&v=4"}},{"before":"e3375ede5485a4754b4e7fa7c8f2e7511439458a","after":"3fae916bbe9f1f4b0ea899dc31204201343c96bb","ref":"refs/heads/fix_training","pushedAt":"2024-05-10T23:51:47.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"fdimaio","name":"Frank DiMaio","path":"/fdimaio","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3934443?s=80&v=4"},"commit":{"message":"Bugfixes for training","shortMessageHtmlLink":"Bugfixes for training"}},{"before":null,"after":"865621fff2d247ba433bda549a798197a1bfb822","ref":"refs/heads/dimaio/updated_training","pushedAt":"2024-05-10T00:04:57.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"fdimaio","name":"Frank DiMaio","path":"/fdimaio","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3934443?s=80&v=4"},"commit":{"message":"Bugfixes for training","shortMessageHtmlLink":"Bugfixes for training"}},{"before":"3705a6b3b36769ae27c3982d7e8b2c7a31788d94","after":"207d9014cefeacc6e45afe8783f367829c1f509e","ref":"refs/heads/density","pushedAt":"2024-05-09T19:12:26.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"fdimaio","name":"Frank DiMaio","path":"/fdimaio","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3934443?s=80&v=4"},"commit":{"message":"Update README.md","shortMessageHtmlLink":"Update README.md"}},{"before":null,"after":"3705a6b3b36769ae27c3982d7e8b2c7a31788d94","ref":"refs/heads/density","pushedAt":"2024-05-09T02:06:14.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"fdimaio","name":"Frank DiMaio","path":"/fdimaio","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3934443?s=80&v=4"},"commit":{"message":"First push of PyRosetta tie-in","shortMessageHtmlLink":"First push of PyRosetta tie-in"}},{"before":"427fd34887c4c72c47e68979e8581585a5934ceb","after":"e3375ede5485a4754b4e7fa7c8f2e7511439458a","ref":"refs/heads/fix_training","pushedAt":"2024-05-08T22:17:53.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"fdimaio","name":"Frank DiMaio","path":"/fdimaio","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3934443?s=80&v=4"},"commit":{"message":"Bugfixes in training","shortMessageHtmlLink":"Bugfixes in training"}},{"before":"d895e123d5f34737780ec28549c334608a438b59","after":"427fd34887c4c72c47e68979e8581585a5934ceb","ref":"refs/heads/fix_training","pushedAt":"2024-05-08T19:05:58.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"fdimaio","name":"Frank DiMaio","path":"/fdimaio","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3934443?s=80&v=4"},"commit":{"message":"Training bugfixes","shortMessageHtmlLink":"Training bugfixes"}},{"before":null,"after":"d895e123d5f34737780ec28549c334608a438b59","ref":"refs/heads/fix_training","pushedAt":"2024-05-08T00:25:04.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"fdimaio","name":"Frank DiMaio","path":"/fdimaio","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3934443?s=80&v=4"},"commit":{"message":"Fix training","shortMessageHtmlLink":"Fix training"}},{"before":"1e299c7f3aa40a0417f230321ff7dd3252905575","after":null,"ref":"refs/heads/dimaio/gpu_mem_efficiency","pushedAt":"2024-04-13T02:07:06.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"fdimaio","name":"Frank DiMaio","path":"/fdimaio","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3934443?s=80&v=4"}},{"before":"703d56ed95622e5e32675c89e038519b05683a85","after":"a26f29bb92d4946ef8bf225edba9240c9e647747","ref":"refs/heads/main","pushedAt":"2024-04-13T02:07:01.000Z","pushType":"pr_merge","commitsCount":30,"pusher":{"login":"fdimaio","name":"Frank DiMaio","path":"/fdimaio","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3934443?s=80&v=4"},"commit":{"message":"Merge pull request #20 from uw-ipd/dimaio/gpu_mem_efficiency\n\nImprove GPU memory efficiency","shortMessageHtmlLink":"Merge pull request #20 from uw-ipd/dimaio/gpu_mem_efficiency"}},{"before":"baf80d215941c2ff064020957c63068fdae47764","after":"1e299c7f3aa40a0417f230321ff7dd3252905575","ref":"refs/heads/dimaio/gpu_mem_efficiency","pushedAt":"2024-04-13T02:05:35.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"fdimaio","name":"Frank DiMaio","path":"/fdimaio","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3934443?s=80&v=4"},"commit":{"message":"Some updates for training","shortMessageHtmlLink":"Some updates for training"}},{"before":"e27563d9ab417484f371d496a0a7b544e94d4107","after":"baf80d215941c2ff064020957c63068fdae47764","ref":"refs/heads/dimaio/gpu_mem_efficiency","pushedAt":"2024-04-13T00:23:31.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"fdimaio","name":"Frank DiMaio","path":"/fdimaio","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3934443?s=80&v=4"},"commit":{"message":"Symmetry bugfix. Default weightfile change. Config update.","shortMessageHtmlLink":"Symmetry bugfix. Default weightfile change. Config update."}},{"before":"576bacf2dd27afb5404f03072fe4839a2f1e7f97","after":"e27563d9ab417484f371d496a0a7b544e94d4107","ref":"refs/heads/dimaio/gpu_mem_efficiency","pushedAt":"2024-01-13T00:23:42.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"fdimaio","name":"Frank DiMaio","path":"/fdimaio","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3934443?s=80&v=4"},"commit":{"message":"Update predict script to fix bug when using templates.","shortMessageHtmlLink":"Update predict script to fix bug when using templates."}},{"before":"15d73c78cae4c54a9275aa3f0966d554e5d58e62","after":"576bacf2dd27afb5404f03072fe4839a2f1e7f97","ref":"refs/heads/dimaio/gpu_mem_efficiency","pushedAt":"2024-01-05T02:29:09.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"fdimaio","name":"Frank DiMaio","path":"/fdimaio","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3934443?s=80&v=4"},"commit":{"message":"One bugfix in template parsing","shortMessageHtmlLink":"One bugfix in template parsing"}},{"before":"7fd4b230437e9cf6cce5bc0c879aa1ad92997327","after":"15d73c78cae4c54a9275aa3f0966d554e5d58e62","ref":"refs/heads/dimaio/gpu_mem_efficiency","pushedAt":"2023-12-20T22:04:19.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"fdimaio","name":"Frank DiMaio","path":"/fdimaio","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3934443?s=80&v=4"},"commit":{"message":"Forgot to deallocate memory on discovering new best.","shortMessageHtmlLink":"Forgot to deallocate memory on discovering new best."}},{"before":"8edf74c809fc6c4d5d1d132edf21ccb493a8ebda","after":"7fd4b230437e9cf6cce5bc0c879aa1ad92997327","ref":"refs/heads/dimaio/gpu_mem_efficiency","pushedAt":"2023-12-20T19:55:23.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"fdimaio","name":"Frank DiMaio","path":"/fdimaio","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3934443?s=80&v=4"},"commit":{"message":"Additional CPU mem reduction.","shortMessageHtmlLink":"Additional CPU mem reduction."}},{"before":"7482f6ecdac091ef49c48646d2abe9624215e323","after":"8edf74c809fc6c4d5d1d132edf21ccb493a8ebda","ref":"refs/heads/dimaio/gpu_mem_efficiency","pushedAt":"2023-12-20T18:11:18.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"fdimaio","name":"Frank DiMaio","path":"/fdimaio","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3934443?s=80&v=4"},"commit":{"message":"Bugfix. Move embedders to half precision.","shortMessageHtmlLink":"Bugfix. Move embedders to half precision."}},{"before":"f596491d82eb360285f112e757710da10d49f714","after":"7482f6ecdac091ef49c48646d2abe9624215e323","ref":"refs/heads/dimaio/gpu_mem_efficiency","pushedAt":"2023-12-20T02:06:08.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"fdimaio","name":"Frank DiMaio","path":"/fdimaio","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3934443?s=80&v=4"},"commit":{"message":"Some more CPU memory savings.","shortMessageHtmlLink":"Some more CPU memory savings."}},{"before":"05b640b3464effaf03268c9b84ffe55fcdfdbe4a","after":"f596491d82eb360285f112e757710da10d49f714","ref":"refs/heads/dimaio/gpu_mem_efficiency","pushedAt":"2023-12-20T02:01:10.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"fdimaio","name":"Frank DiMaio","path":"/fdimaio","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3934443?s=80&v=4"},"commit":{"message":"Some CPU memory savings.","shortMessageHtmlLink":"Some CPU memory savings."}},{"before":"974dda601c849a8a9a2d8f9ac43e1a24a99594a2","after":"05b640b3464effaf03268c9b84ffe55fcdfdbe4a","ref":"refs/heads/dimaio/gpu_mem_efficiency","pushedAt":"2023-12-20T00:10:38.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"fdimaio","name":"Frank DiMaio","path":"/fdimaio","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3934443?s=80&v=4"},"commit":{"message":"Add structure dumping back in.","shortMessageHtmlLink":"Add structure dumping back in."}},{"before":"6680daea5b1c1d136cccd07db06c5fd5a41e61ff","after":"974dda601c849a8a9a2d8f9ac43e1a24a99594a2","ref":"refs/heads/dimaio/gpu_mem_efficiency","pushedAt":"2023-12-20T00:01:16.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"fdimaio","name":"Frank DiMaio","path":"/fdimaio","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3934443?s=80&v=4"},"commit":{"message":"A few more bugfixes. Memory savings in template embedder.","shortMessageHtmlLink":"A few more bugfixes. Memory savings in template embedder."}},{"before":"134e43f35b2fc6529e321e692c649cb3638f437a","after":"6680daea5b1c1d136cccd07db06c5fd5a41e61ff","ref":"refs/heads/dimaio/gpu_mem_efficiency","pushedAt":"2023-12-19T01:06:29.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"fdimaio","name":"Frank DiMaio","path":"/fdimaio","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3934443?s=80&v=4"},"commit":{"message":"More memory savings and speedups.","shortMessageHtmlLink":"More memory savings and speedups."}}],"hasNextPage":true,"hasPreviousPage":false,"activityType":"all","actor":null,"timePeriod":"all","sort":"DESC","perPage":30,"cursor":"djE6ks8AAAAEoJQ4QAA","startCursor":null,"endCursor":null}},"title":"Activity ยท uw-ipd/RoseTTAFold2"}