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utils.py
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utils.py
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import os
import random
import torch
import numpy as np
from time import time
device = torch.device("cuda:0" if torch.cuda.is_available() else "cpu")
class ConfusionMatrix():
def __init__(self, n_classes):
self.n_classes = n_classes
self.mat = np.zeros([n_classes, n_classes])
def update_mat(self, preds, labels, idxs):
idxs = np.array(idxs)
real_pred = idxs[preds]
real_labels = idxs[labels]
self.mat[real_pred, real_labels] += 1
def get_mat(self):
return self.mat
class Accumulator():
def __init__(self, max_size=2000):
self.max_size = max_size
self.ac = np.empty(0)
def append(self, v):
self.ac = np.append(self.ac[-self.max_size:], v)
def reset(self):
self.ac = np.empty(0)
def mean(self, last=None):
last = last if last else self.max_size
return self.ac[-last:].mean()
class IterBeat():
def __init__(self, freq, length=None):
self.length = length
self.freq = freq
def step(self, i):
if i == 0:
self.t = time()
self.lastcall = 0
else:
if ((i % self.freq) == 0) or ((i + 1) == self.length):
t = time()
print('{0} / {1} ---- {2:.2f} it/sec'.format(
i, self.length, (i - self.lastcall) / (t - self.t)))
self.lastcall = i
self.t = t
class SerializableArray(object):
def __init__(self, array):
self.shape = array.shape
self.data = array.tobytes()
self.dtype = array.dtype
def get(self):
array = np.frombuffer(self.data, self.dtype)
return np.reshape(array, self.shape)
class Recorder(object):
def __init__(self, saveroot:str, datasets:list, key_wd_list:list=None) -> None:
"""
Args:
saveroot: the root path of for saving the record file.
key_wd_list: A list of strings that are key words of records.
"""
self.saveroot = saveroot
self.datasets = datasets
if key_wd_list is None:
raise ValueError("No value to be recorded.")
else:
self.key_words = key_wd_list
if self.key_words:
self.records = self.generate_record_dict(self.datasets, self.key_words)
def generate_record_dict(self, datasets, keywords):
record_dict = {}
for dataset in datasets:
record_dict[dataset] = {}
for kw in keywords:
record_dict[dataset][kw] = []
return record_dict
def update_records(self, dataset:str, valueDict:dict):
'''
Args:
valueDict: A dict of values in which the keys should be consistent with the keys of self.records
'''
for key in valueDict.keys():
self.records[dataset][key].append(valueDict[key])
def save(self, filename:str):
if not os.path.exists(self.saveroot):
os.makedirs(self.saveroot)
filepath = os.path.join(self.saveroot, filename + '.npy')
np.save(filepath, self.records)
def print_res(array, name, file=None, prec=4, mult=1):
array = np.array(array) * mult
mean, std = np.mean(array), np.std(array)
conf = 1.96 * std / np.sqrt(len(array))
stat_string = ("test {:s}: {:0.%df} +/- {:0.%df}"
% (prec, prec)).format(name, mean, conf)
print(stat_string)
if file is not None:
with open(file, 'a+') as f:
f.write(stat_string + '\n')
def process_copies(embeddings, labels, args):
n_copy = args['test.n_copy']
test_embeddings = embeddings.view(
args['data.test_query'] * args['data.test_way'],
n_copy, -1).mean(dim=1)
return test_embeddings, labels[0::n_copy]
def set_determ(seed=1234):
random.seed(seed)
np.random.seed(seed)
torch.manual_seed(seed)
torch.cuda.manual_seed(seed)
torch.cuda.manual_seed_all(seed)
def merge_dicts(dicts, torch_stack=True):
def stack_fn(l):
if isinstance(l[0], torch.Tensor):
return torch.stack(l)
elif isinstance(l[0], str):
return l
else:
return torch.tensor(l)
keys = dicts[0].keys()
new_dict = {key: [] for key in keys}
for key in keys:
for d in dicts:
new_dict[key].append(d[key])
if torch_stack:
for key in keys:
new_dict[key] = stack_fn(new_dict[key])
return new_dict
def voting(preds, pref_ind=0):
n_models = len(preds)
n_test = len(preds[0])
final_preds = []
for i in range(n_test):
cur_preds = [preds[k][i] for k in range(n_models)]
classes, counts = np.unique(cur_preds, return_counts=True)
if (counts == max(counts)).sum() > 1:
final_preds.append(preds[pref_ind][i])
else:
final_preds.append(classes[np.argmax(counts)])
return final_preds
def agreement(preds):
n_preds = preds.shape[0]
mat = np.zeros((n_preds, n_preds))
for i in range(n_preds):
for j in range(i, n_preds):
mat[i, j] = mat[j, i] = (
preds[i] == preds[j]).astype('float').mean()
return mat
def read_textfile(filename, skip_last_line=True):
with open(filename, 'r') as f:
container = f.read().split('\n')
if skip_last_line:
container = container[:-1]
return container
def check_dir(dirname, verbose=True):
"""This function creates a directory
in case it doesn't exist"""
try:
# Create target Directory
os.makedirs(dirname)
if verbose:
print("Directory ", dirname, " was created")
except FileExistsError:
if verbose:
print("Directory ", dirname, " already exists")
return dirname
def setup_seed(seed_id:int):
torch.manual_seed(seed_id)
torch.cuda.manual_seed_all(seed_id)
np.random.seed(seed_id)
random.seed(seed_id)
torch.backends.cudnn.deterministic=True
def spectrum_norm(m:torch.tensor) -> torch.tensor:
'''calculate the spectrum norm of a parameter matrix.'''
eigvals, eigvecs = torch.eig(m)
max_val = torch.max(eigvals)
if max_val.item() < 0:
max_val = torch.tensor(1.0).type_as(max_val)
return m / max_val