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phenotype_table.txt
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phenotype_table.txt
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gene number name rules
cacna1s 1 poor_metabolizer ==:0,
cacna1s 2 intermediate_metabolizer >:0,<=:1,
cacna1s 3 normal_metabolizer >:1,<=:2,
cacna1s 4 rapid_metabolizer >:2,<=:2.5,
cacna1s 5 ultrarapid_metabolizer >:2.5,
cftr 1 poor_metabolizer ==:0,
cftr 2 intermediate_metabolizer >:0,<=:1,
cftr 3 normal_metabolizer >:1,<=:2,
cftr 4 rapid_metabolizer >:2,<=:2.5,
cftr 5 ultrarapid_metabolizer >:2.5,
cyp1a1 1 poor_metabolizer ==:0,
cyp1a1 2 intermediate_metabolizer >:0,<=:1,
cyp1a1 3 normal_metabolizer >:1,<=:2,
cyp1a1 4 rapid_metabolizer >:2,<=:2.5,
cyp1a1 5 ultrarapid_metabolizer >:2.5,
cyp1a2 1 poor_metabolizer ==:0,
cyp1a2 2 intermediate_metabolizer >:0,<=:1,
cyp1a2 3 normal_metabolizer >:1,<=:2,
cyp1a2 4 rapid_metabolizer >:2,<=:2.5,
cyp1a2 5 ultrarapid_metabolizer >:2.5,
cyp1b1 1 poor_metabolizer ==:0,
cyp1b1 2 intermediate_metabolizer >:0,<=:1,
cyp1b1 3 normal_metabolizer >:1,<=:2,
cyp1b1 4 rapid_metabolizer >:2,<=:2.5,
cyp1b1 5 ultrarapid_metabolizer >:2.5,
cyp2a6 1 poor_metabolizer ==:0,
cyp2a6 2 slow_metabolizer >:0,<:2,
cyp2a6 3 normal_metabolizer ==:2,
cyp2a6 4 ultrarapid_metabolizer >:2,
cyp2a13 1 poor_metabolizer ==:0,
cyp2a13 2 intermediate_metabolizer >:0,<=:1,
cyp2a13 3 normal_metabolizer >:1,<=:2,
cyp2a13 4 rapid_metabolizer >:2,<=:2.5,
cyp2a13 5 ultrarapid_metabolizer >:2.5,
cyp2b6 1 poor_metabolizer ==:0,
cyp2b6 2 intermediate_metabolizer >:0,<=:1,
cyp2b6 3 normal_metabolizer >:1,<=:2,
cyp2b6 4 rapid_metabolizer >:2,<=:2.5,
cyp2b6 5 ultrarapid_metabolizer >:2.5,
cyp2c8 1 poor_metabolizer ==:0,
cyp2c8 2 intermediate_metabolizer >:0,<=:1,
cyp2c8 3 normal_metabolizer >:1,<=:2,
cyp2c8 4 rapid_metabolizer >:2,<=:2.5,
cyp2c8 5 ultrarapid_metabolizer >:2.5,
cyp2c9 1 poor_metabolizer ==:0,
cyp2c9 2 intermediate_metabolizer >:0,<=:1,
cyp2c9 3 normal_metabolizer >:1,<=:2,
cyp2c9 4 rapid_metabolizer >:2,<=:2.5,
cyp2c9 5 ultrarapid_metabolizer >:2.5,
cyp2c19 1 poor_metabolizer ==:0,
cyp2c19 2 intermediate_metabolizer >:0,<=:1,
cyp2c19 3 normal_metabolizer >:1,<=:2,
cyp2c19 4 rapid_metabolizer >:2,<=:2.5,
cyp2c19 5 ultrarapid_metabolizer >:2.5,
cyp2d6 1 poor_metabolizer ==:0,
cyp2d6 2 intermediate_metabolizer >:0,<=:1,
cyp2d6 3 normal_metabolizer >:1,<=:2.25,
cyp2d6 4 ultrarapid_metabolizer >:2.25,
cyp2e1 1 poor_metabolizer ==:0,
cyp2e1 2 intermediate_metabolizer >:0,<=:1,
cyp2e1 3 normal_metabolizer >:1,<=:2,
cyp2e1 4 rapid_metabolizer >:2,<=:2.5,
cyp2e1 5 ultrarapid_metabolizer >:2.5,
cyp2f1 1 poor_metabolizer ==:0,
cyp2f1 2 intermediate_metabolizer >:0,<=:1,
cyp2f1 3 normal_metabolizer >:1,<=:2,
cyp2f1 4 rapid_metabolizer >:2,<=:2.5,
cyp2f1 5 ultrarapid_metabolizer >:2.5,
cyp2j2 1 poor_metabolizer ==:0,
cyp2j2 2 intermediate_metabolizer >:0,<=:1,
cyp2j2 3 normal_metabolizer >:1,<=:2,
cyp2j2 4 rapid_metabolizer >:2,<=:2.5,
cyp2j2 5 ultrarapid_metabolizer >:2.5,
cyp2r1 1 poor_metabolizer ==:0,
cyp2r1 2 intermediate_metabolizer >:0,<=:1,
cyp2r1 3 normal_metabolizer >:1,<=:2,
cyp2r1 4 rapid_metabolizer >:2,<=:2.5,
cyp2r1 5 ultrarapid_metabolizer >:2.5,
cyp2s1 1 poor_metabolizer ==:0,
cyp2s1 2 intermediate_metabolizer >:0,<=:1,
cyp2s1 3 normal_metabolizer >:1,<=:2,
cyp2s1 4 rapid_metabolizer >:2,<=:2.5,
cyp2s1 5 ultrarapid_metabolizer >:2.5,
cyp2w1 1 poor_metabolizer ==:0,
cyp2w1 2 intermediate_metabolizer >:0,<=:1,
cyp2w1 3 normal_metabolizer >:1,<=:2,
cyp2w1 4 rapid_metabolizer >:2,<=:2.5,
cyp2w1 5 ultrarapid_metabolizer >:2.5,
cyp3a4 1 poor_metabolizer ==:0,
cyp3a4 2 intermediate_metabolizer >:0,<=:1,
cyp3a4 3 normal_metabolizer >:1,<=:2,
cyp3a4 4 rapid_metabolizer >:2,<=:2.5,
cyp3a4 5 ultrarapid_metabolizer >:2.5,
cyp3a5 1 poor_metabolizer ==:0,
cyp3a5 2 intermediate_metabolizer >:0,<=:1,
cyp3a5 3 normal_metabolizer >:1,<=:2,
cyp3a5 4 rapid_metabolizer >:2,<=:2.5,
cyp3a5 5 ultrarapid_metabolizer >:2.5,
cyp3a7 1 poor_metabolizer ==:0,
cyp3a7 2 intermediate_metabolizer >:0,<=:1,
cyp3a7 3 normal_metabolizer >:1,<=:2,
cyp3a7 4 rapid_metabolizer >:2,<=:2.5,
cyp3a7 5 ultrarapid_metabolizer >:2.5,
cyp3a43 1 poor_metabolizer ==:0,
cyp3a43 2 intermediate_metabolizer >:0,<=:1,
cyp3a43 3 normal_metabolizer >:1,<=:2,
cyp3a43 4 rapid_metabolizer >:2,<=:2.5,
cyp3a43 5 ultrarapid_metabolizer >:2.5,
cyp4b1 1 poor_metabolizer ==:0,
cyp4b1 2 intermediate_metabolizer >:0,<=:1,
cyp4b1 3 normal_metabolizer >:1,<=:2,
cyp4b1 4 rapid_metabolizer >:2,<=:2.5,
cyp4b1 5 ultrarapid_metabolizer >:2.5,
cyp4f2 1 poor_metabolizer ==:0,
cyp4f2 2 intermediate_metabolizer >:0,<=:1,
cyp4f2 3 normal_metabolizer >:1,<=:2,
cyp4f2 4 rapid_metabolizer >:2,<=:2.5,
cyp4f2 5 ultrarapid_metabolizer >:2.5,
cyp19a1 1 poor_metabolizer ==:0,
cyp19a1 2 intermediate_metabolizer >:0,<=:1,
cyp19a1 3 normal_metabolizer >:1,<=:2,
cyp19a1 4 rapid_metabolizer >:2,<=:2.5,
cyp19a1 5 ultrarapid_metabolizer >:2.5,
cyp26a1 1 poor_metabolizer ==:0,
cyp26a1 2 intermediate_metabolizer >:0,<=:1,
cyp26a1 3 normal_metabolizer >:1,<=:2,
cyp26a1 4 rapid_metabolizer >:2,<=:2.5,
cyp26a1 5 ultrarapid_metabolizer >:2.5,
dpyd 1 poor_metabolizer ==:0,
dpyd 2 intermediate_metabolizer >:0,<=:1,
dpyd 3 normal_metabolizer >:1,<=:2,
dpyd 4 rapid_metabolizer >:2,<=:2.5,
dpyd 5 ultrarapid_metabolizer >:2.5,
g6pd 1 poor_metabolizer ==:0,
g6pd 2 intermediate_metabolizer >:0,<=:1,
g6pd 3 normal_metabolizer >:1,<=:2,
g6pd 4 rapid_metabolizer >:2,<=:2.5,
g6pd 5 ultrarapid_metabolizer >:2.5,
gstm1 1 poor_metabolizer ==:0,
gstm1 2 intermediate_metabolizer >:0,<=:1,
gstm1 3 normal_metabolizer >:1,<=:2,
gstm1 4 rapid_metabolizer >:2,<=:2.5,
gstm1 5 ultrarapid_metabolizer >:2.5,
gstp1 1 poor_metabolizer ==:0,
gstp1 2 intermediate_metabolizer >:0,<=:1,
gstp1 3 normal_metabolizer >:1,<=:2,
gstp1 4 rapid_metabolizer >:2,<=:2.5,
gstp1 5 ultrarapid_metabolizer >:2.5,
gstt1 1 poor_metabolizer ==:0,
gstt1 2 intermediate_metabolizer >:0,<=:1,
gstt1 3 normal_metabolizer >:1,<=:2,
gstt1 4 rapid_metabolizer >:2,<=:2.5,
gstt1 5 ultrarapid_metabolizer >:2.5,
ifnl3 1 unfavorable_response <:2,
ifnl3 2 favorable_response >=:2,
nat1 1 poor_metabolizer ==:0,
nat1 2 intermediate_metabolizer >:0,<=:1,
nat1 3 normal_metabolizer >:1,<=:2,
nat1 4 rapid_metabolizer >:2,<=:2.5,
nat1 5 ultrarapid_metabolizer >:2.5,
nat2 1 poor_metabolizer ==:0,
nat2 2 intermediate_metabolizer >:0,<=:1,
nat2 3 normal_metabolizer >:1,<=:2,
nat2 4 rapid_metabolizer >:2,<=:2.5,
nat2 5 ultrarapid_metabolizer >:2.5,
nudt15 1 poor_metabolizer ==:0,
nudt15 2 intermediate_metabolizer >:0,<=:1,
nudt15 3 normal_metabolizer >:1,<=:2,
nudt15 4 rapid_metabolizer >:2,<=:2.5,
nudt15 5 ultrarapid_metabolizer >:2.5,
por 1 poor_metabolizer ==:0,
por 2 intermediate_metabolizer >:0,<=:1,
por 3 normal_metabolizer >:1,<=:2,
por 4 rapid_metabolizer >:2,<=:2.5,
por 5 ultrarapid_metabolizer >:2.5,
ryr1 1 poor_metabolizer ==:0,
ryr1 2 intermediate_metabolizer >:0,<=:1,
ryr1 3 normal_metabolizer >:1,<=:2,
ryr1 4 rapid_metabolizer >:2,<=:2.5,
ryr1 5 ultrarapid_metabolizer >:2.5,
slc15a2 1 poor_metabolizer ==:0,
slc15a2 2 intermediate_metabolizer >:0,<=:1,
slc15a2 3 normal_metabolizer >:1,<=:2,
slc15a2 4 rapid_metabolizer >:2,<=:2.5,
slc15a2 5 ultrarapid_metabolizer >:2.5,
slc22a2 1 poor_metabolizer ==:0,
slc22a2 2 intermediate_metabolizer >:0,<=:1,
slc22a2 3 normal_metabolizer >:1,<=:2,
slc22a2 4 rapid_metabolizer >:2,<=:2.5,
slc22a2 5 ultrarapid_metabolizer >:2.5,
slco1b1 1 poor_function <=:1,
slco1b1 2 decreased_function >:1,<=:1.5,
slco1b1 3 normal_function >:1.5,<=:2,
slco1b1 4 increased_function >:2,
slco1b3 1 poor_function <=:1,
slco1b3 2 decreased_function >:1,<=:1.5,
slco1b3 3 normal_function >:1.5,<=:2,
slco1b3 4 increased_function >:2,
slco2b1 1 poor_metabolizer ==:0,
slco2b1 2 intermediate_metabolizer >:0,<=:1,
slco2b1 3 normal_metabolizer >:1,<=:2,
slco2b1 4 rapid_metabolizer >:2,<=:2.5,
slco2b1 5 ultrarapid_metabolizer >:2.5,
sult1a1 1 poor_metabolizer ==:0,
sult1a1 2 intermediate_metabolizer >:0,<=:1,
sult1a1 3 normal_metabolizer >:1,<=:2,
sult1a1 4 rapid_metabolizer >:2,<=:2.5,
sult1a1 5 ultrarapid_metabolizer >:2.5,
tbxas1 1 poor_metabolizer ==:0,
tbxas1 2 intermediate_metabolizer >:0,<=:1,
tbxas1 3 normal_metabolizer >:1,<=:2,
tbxas1 4 rapid_metabolizer >:2,<=:2.5,
tbxas1 5 ultrarapid_metabolizer >:2.5,
tpmt 1 poor_metabolizer ==:0,
tpmt 2 intermediate_metabolizer >:0,<=:1,
tpmt 3 normal_metabolizer >:1,<=:2,
tpmt 4 rapid_metabolizer >:2,<=:2.5,
tpmt 5 ultrarapid_metabolizer >:2.5,
ugt1a1 1 poor_metabolizer ==:0,
ugt1a1 2 intermediate_metabolizer >:0,<=:1,
ugt1a1 3 normal_metabolizer >:1,<=:2,
ugt1a1 4 rapid_metabolizer >:2,<=:2.5,
ugt1a1 5 ultrarapid_metabolizer >:2.5,
ugt1a4 1 poor_metabolizer ==:0,
ugt1a4 2 intermediate_metabolizer >:0,<=:1,
ugt1a4 3 normal_metabolizer >:1,<=:2,
ugt1a4 4 rapid_metabolizer >:2,<=:2.5,
ugt1a4 5 ultrarapid_metabolizer >:2.5,
ugt2b7 1 poor_metabolizer ==:0,
ugt2b7 2 intermediate_metabolizer >:0,<=:1,
ugt2b7 3 normal_metabolizer >:1,<=:2,
ugt2b7 4 rapid_metabolizer >:2,<=:2.5,
ugt2b7 5 ultrarapid_metabolizer >:2.5,
ugt2b15 1 poor_metabolizer ==:0,
ugt2b15 2 intermediate_metabolizer >:0,<=:1,
ugt2b15 3 normal_metabolizer >:1,<=:2,
ugt2b15 4 rapid_metabolizer >:2,<=:2.5,
ugt2b15 5 ultrarapid_metabolizer >:2.5,
ugt2b17 1 poor_metabolizer ==:0,
ugt2b17 2 intermediate_metabolizer >:0,<=:1,
ugt2b17 3 normal_metabolizer >:1,<=:2,
ugt2b17 4 rapid_metabolizer >:2,<=:2.5,
ugt2b17 5 ultrarapid_metabolizer >:2.5,
vkorc1 1 poor_metabolizer ==:0,
vkorc1 2 intermediate_metabolizer >:0,<=:1,
vkorc1 3 normal_metabolizer >:1,<=:2,
vkorc1 4 rapid_metabolizer >:2,<=:2.5,
vkorc1 5 ultrarapid_metabolizer >:2.5,