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DESCRIPTION
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DESCRIPTION
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Package: GENOVA
Title: GENOVA: expore the Hi-C
Version: 1.0.1
Authors@R: c(
person("Robin H.", "van der Weide", email = "r.vd.weide@nki.nl", role = c("aut", "cre")),
person("Teun", "van den Brand", email = "t.vd.brand@nki.nl", role = "aut"),
person("Elzo", "de Wit", email = "e.d.wit@nki.nl", role = "aut"))
Description: GENOVA consist of a set of analysis- and visualisation-functions. These will help to discover valuable information buried deep in your HiC-matrices.
Depends:
R (>= 3.5.0)
License: MIT + file LICENSE
Encoding: UTF-8
LazyData: true
Imports:
ggplot2 (>= 3.3.0),
scales (>= 1.1.1),
data.table,
methods
RoxygenNote: 7.1.1
Suggests:
knitr,
rmarkdown,
HiCseg,
RhpcBLASctl,
RCurl,
strawr (>= 0.0.1),
rhdf5 (>= 2.30.0),
rtracklayer,
IRanges,
pkgfilecache
VignetteBuilder: knitr
Remotes: aidenlab/straw/R,
bioc::release/rhdf5,
bioc::release/rtracklayer,
bioc::release/IRanges