.travis.yml

sudo: false

os: linux
dist: trusty

language: c

compiler:
  - clang
  - gcc

env:
  global:
    - MAKEFLAGS="-j2"

matrix:
  include:
    # An unoptimised C99 build, for detecting non-static inline functions
    - compiler: gcc
      env:
        - CFLAGS="-std=gnu99 -O0"
        - CXXFLAGS="-O0"

addons:
  apt:
    packages:
      - liblzma-dev
      - libbz2-dev

before_script:
  - git clone --branch=develop --recursive git://github.com/samtools/htslib.git
  - cd htslib; make;cd ..
  - git clone --depth=5 --branch=develop git://github.com/samtools/samtools.git
  - cd samtools;make;cd ..

  - git clone --depth=5 git://github.com/ANGSD/smallBam.git
  - export HTSSRC=`pwd`/htslib
  - export BAMDIR=`pwd`/smallBam/

script:
  - make
  - make test BAMDIR=`pwd`/smallBam/