diff --git a/files/minimac4.yaml b/files/minimac4.yaml index 492ceadb..7aac1551 100644 --- a/files/minimac4.yaml +++ b/files/minimac4.yaml @@ -1,7 +1,7 @@ id: imputationserver name: Genotype Imputation (Minimac4) description: This is the new Imputation Server Pipeline using Minimac4. Documentation can be found here.

If your input data is GRCh37/hg19 please ensure chromosomes are encoded without prefix (e.g. 20).
If your input data is GRCh38/hg38 please ensure chromosomes are encoded with prefix 'chr' (e.g. chr20).

There is a limit of three concurrent jobs per person. The TOPMed imputation server is a free resource, and these limits allow us to provide service to a wide audience. We reserve the right to terminate users who violate this policy. -version: 2.0.0 +version: 2.0.0-beta2 website: https://topmedimpute.readthedocs.io/en/latest/ category: diff --git a/pom.xml b/pom.xml index 34badd94..44fadb8c 100644 --- a/pom.xml +++ b/pom.xml @@ -5,7 +5,7 @@ genepi imputationserver - 2.0.0 + 2.0.0-beta2 jar University of Michigan Imputation Server http://maven.apache.org diff --git a/src/main/java/genepi/imputationserver/steps/imputation/ImputationPipeline.java b/src/main/java/genepi/imputationserver/steps/imputation/ImputationPipeline.java index 61e9a505..7cbc94cf 100644 --- a/src/main/java/genepi/imputationserver/steps/imputation/ImputationPipeline.java +++ b/src/main/java/genepi/imputationserver/steps/imputation/ImputationPipeline.java @@ -24,7 +24,7 @@ public class ImputationPipeline { - public static final String PIPELINE_VERSION = "michigan-imputationserver-2.0.0"; + public static final String PIPELINE_VERSION = "michigan-imputationserver-2.0.0-beta2"; public static final String IMPUTATION_VERSION = "minimac-v4.1.6";