snp.h

#ifndef __SNP_H__
#define __SNP_H__


/* maximum sequence length of alleles (longer are truncated in snp_tab) */
#define SNP_MAX_ALLELE 100

/* maximum length of chromosome name */
/* #define SNP_MAX_CHROM 32 */
/* maximum length of SNP identifier */
#define SNP_MAX_NAME 16


typedef struct {
  char name[SNP_MAX_NAME];
  /*   char chrom[SNP_MAX_CHROM]; */
  long pos;
  char allele1[SNP_MAX_ALLELE];
  char allele2[SNP_MAX_ALLELE];
} SNP;



#endif