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BIGCAT (working title)

Compile

To compile a "fat jar" with all dependencies added, run:

mvn clean compile assembly:single

Run

java -Xmx16G -jar target/bigcat-0.0.1-SNAPSHOT-jar-with-dependencies.jar -i <input_hdf_file>

Development

Join the chat at https://gitter.im/saalfeldlab/bigcat Collaborative volume annotation and segmentation with BigDataViewer

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Collaborative volume annotation and segmentation with BigDataViewer

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  • Java 99.7%
  • Shell 0.3%