pomp_handover\pomp
contains files (RMD, RData, PDF) relating to the adaptation of the waning COVID-19 immunity model to a pomp framework;working_pomp_code.Rmd
contains the most useful/relevant pieces of code;
pomp_handover\waning_immunity
contains files (RMD, PDF, SVG) with the addition of a vaccinated compartment to the waning COVID-19 immunity model;