Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Custom dataloader registry support #2932

Open
wants to merge 90 commits into
base: main
Choose a base branch
from

Conversation

ori-kron-wis
Copy link
Collaborator

No description provided.

@ori-kron-wis ori-kron-wis added this to the scvi-tools 1.2 milestone Aug 7, 2024
@ori-kron-wis ori-kron-wis self-assigned this Aug 7, 2024
@ori-kron-wis ori-kron-wis linked an issue Aug 7, 2024 that may be closed by this pull request
Copy link

codecov bot commented Aug 11, 2024

Codecov Report

Attention: Patch coverage is 50.43860% with 113 lines in your changes missing coverage. Please review.

Project coverage is 82.50%. Comparing base (835d17a) to head (31e1d44).

Files with missing lines Patch % Lines
src/scvi/model/base/_base_model.py 37.60% 73 Missing ⚠️
src/scvi/model/_scanvi.py 58.13% 18 Missing ⚠️
src/scvi/model/_scvi.py 47.82% 12 Missing ⚠️
src/scvi/model/base/_archesmixin.py 75.00% 8 Missing ⚠️
src/scvi/model/base/_save_load.py 75.00% 1 Missing ⚠️
src/scvi/model/base/_training_mixin.py 50.00% 1 Missing ⚠️

❗ There is a different number of reports uploaded between BASE (835d17a) and HEAD (31e1d44). Click for more details.

HEAD has 13 uploads less than BASE
Flag BASE (835d17a) HEAD (31e1d44)
16 3
Additional details and impacted files
@@            Coverage Diff             @@
##             main    #2932      +/-   ##
==========================================
- Coverage   90.14%   82.50%   -7.65%     
==========================================
  Files         181      181              
  Lines       15644    15548      -96     
==========================================
- Hits        14103    12828    -1275     
- Misses       1541     2720    +1179     
Files with missing lines Coverage Δ
src/scvi/data/_utils.py 87.57% <100.00%> (+0.53%) ⬆️
src/scvi/external/stereoscope/_model.py 92.40% <ø> (ø)
src/scvi/external/stereoscope/_module.py 96.33% <ø> (ø)
src/scvi/model/_amortizedlda.py 94.11% <ø> (ø)
src/scvi/model/_autozi.py 95.40% <ø> (ø)
src/scvi/model/_condscvi.py 95.74% <ø> (ø)
src/scvi/model/_jaxscvi.py 92.30% <ø> (ø)
src/scvi/model/_linear_scvi.py 94.87% <ø> (ø)
src/scvi/model/_multivi.py 75.08% <ø> (ø)
src/scvi/model/_peakvi.py 87.09% <ø> (ø)
... and 7 more

... and 28 files with indirect coverage changes

Copy link

Check out this pull request on  ReviewNB

See visual diffs & provide feedback on Jupyter Notebooks.


Powered by ReviewNB

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
Projects
None yet
Development

Successfully merging this pull request may close these issues.

Fix custom dataloader registry
2 participants