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DESCRIPTION
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DESCRIPTION
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Package: scrm
Type: Package
Title: Simulating the Evolution of Biological Sequences
Version: 1.7.5
Authors@R: c(
person('Paul', 'Staab', role=c('aut', 'cph')),
person('Zhu', 'Sha', role=c('aut', 'cph')),
person('Dirk', 'Metzler', , 'metzler@bio.lmu.de', role=c('aut', 'cre', 'cph', 'ths')),
person('Gerton', 'Lunter', role=c('aut', 'cph', 'ths'))
)
Author: Paul Staab [aut, cph],
Zhu Sha [aut, cph],
Dirk Metzler [aut, cre, cph, ths],
Gerton Lunter [aut, cph, ths]
Maintainer: Dirk Metzler <metzler@bio.lmu.de>
Description: A coalescent simulator that allows the rapid simulation of
biological sequences under neutral models of evolution, see
Staab et al. (2015) <doi:10.1093/bioinformatics/btu861>.
Different to other coalescent based simulations,
it has an optional approximation parameter that
allows for high accuracy while maintaining a linear run time cost for long
sequences. It is optimized for simulating massive data sets as produced by Next-
Generation Sequencing technologies for up to several thousand sequences.
URL: https://github.com/scrm/scrm-r
BugReports: https://github.com/scrm/scrm-r/issues
License: GPL (>= 3)
Depends:
R (>= 3.1.0)
Imports:
Rcpp (>= 0.11.2)
Suggests:
ape,
knitr,
rmarkdown,
testthat (>= 0.9.0)
VignetteBuilder: knitr
LinkingTo: Rcpp
RoxygenNote: 6.1.0