diff --git a/R/differential_expression.R b/R/differential_expression.R index 3abf832e9..60cba62f8 100644 --- a/R/differential_expression.R +++ b/R/differential_expression.R @@ -627,6 +627,7 @@ FindMarkers.Assay <- function( cells.1 = cells.1, cells.2 = cells.2, features = features, + pseudocount.use = pseudocount.use, mean.fxn = mean.fxn, fc.name = fc.name, base = base @@ -680,6 +681,7 @@ FindMarkers.DimReduc <- function( min.cells.group = 3, pseudocount.use = 1, mean.fxn = rowMeans, + fc.name = NULL, ... ) { @@ -705,7 +707,9 @@ FindMarkers.DimReduc <- function( object = object, cells.1 = cells.1, cells.2 = cells.2, - features = features + features = features, + mean.fxn = mean.fxn, + fc.name = fc.name ) # subsample cell groups if they are too large if (max.cells.per.ident < Inf) {