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Bump tifffile from 2023.9.18 to 2023.9.26 in /envs #561

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merged 1 commit into from
Sep 28, 2023

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@dependabot dependabot bot commented on behalf of github Sep 27, 2023

Bumps tifffile from 2023.9.18 to 2023.9.26.

Release notes

Sourced from tifffile's releases.

v2023.9.26

Tifffile is a Python library to

  1. store NumPy arrays in TIFF (Tagged Image File Format) files, and
  2. read image and metadata from TIFF-like files used in bioimaging.

Image and metadata can be read from TIFF, BigTIFF, OME-TIFF, DNG, STK, LSM, SGI, NIHImage, ImageJ, MMStack, NDTiff, FluoView, ScanImage, SEQ, GEL, SVS, SCN, SIS, BIF, ZIF (Zoomable Image File Format), QPTIFF (QPI, PKI), NDPI, and GeoTIFF formatted files.

Image data can be read as NumPy arrays or Zarr arrays/groups from strips, tiles, pages (IFDs), SubIFDs, higher order series, and pyramidal levels.

Image data can be written to TIFF, BigTIFF, OME-TIFF, and ImageJ hyperstack compatible files in multi-page, volumetric, pyramidal, memory-mappable, tiled, predicted, or compressed form.

Many compression and predictor schemes are supported via the imagecodecs library, including LZW, PackBits, Deflate, PIXTIFF, LZMA, LERC, Zstd, JPEG (8 and 12-bit, lossless), JPEG 2000, JPEG XR, JPEG XL, WebP, PNG, EER, Jetraw, 24-bit floating-point, and horizontal differencing.

Tifffile can also be used to inspect TIFF structures, read image data from multi-dimensional file sequences, write fsspec ReferenceFileSystem for TIFF files and image file sequences, patch TIFF tag values, and parse many proprietary metadata formats.

Changelog

Sourced from tifffile's changelog.

2023.9.26

  • Pass 5069 tests.
  • Lazily convert dask array to ndarray when writing.
  • Allow to specify buffersize for reading and writing.
  • Fix IndexError reading some corrupted files with ZarrTiffStore (#227).
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Bumps [tifffile](https://github.com/cgohlke/tifffile) from 2023.9.18 to 2023.9.26.
- [Release notes](https://github.com/cgohlke/tifffile/releases)
- [Changelog](https://github.com/cgohlke/tifffile/blob/master/CHANGES.rst)
- [Commits](cgohlke/tifffile@v2023.9.18...v2023.9.26)

---
updated-dependencies:
- dependency-name: tifffile
  dependency-type: direct:production
  update-type: version-update:semver-patch
...

Signed-off-by: dependabot[bot] <support@github.com>
@dependabot dependabot bot added the dependencies Issues/requests related to a dependency package label Sep 27, 2023
@yoda-vid yoda-vid merged commit 346fc64 into master Sep 28, 2023
36 checks passed
@dependabot dependabot bot deleted the dependabot/pip/envs/tifffile-2023.9.26 branch September 28, 2023 16:37
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