Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Input to biblioshiny #123

Open
trangdata opened this issue Jul 15, 2023 · 2 comments
Open

Input to biblioshiny #123

trangdata opened this issue Jul 15, 2023 · 2 comments

Comments

@trangdata
Copy link
Collaborator

@rkrug reported this issue to me via Slack. @massimoaria could you take a look plz? 🌻

Rainer is trying to load the output from oa2bibliometrix to an application called biblioshiny, but it seems like there are a few columns missing. I believe we can fill in to increase the completeness of the data, for example, change the column name doi to DI (but I'm unsure if we need to make it all uppercase). I'm not that familiar with biblioshiny but maybe you can help @massimoaria. Other columns we can try to fill: DE, LA, NR, WC, which are keywords, language, number of cited references, science categories, respectively.

library(openalexR)
#> Thank you for using openalexR!
#> To acknowledge our work, please cite the package by calling
#> `citation("openalexR")`.
flat_snow <- snowball2df(oa_snowball(
  identifier = "W1516819724",
  verbose = TRUE
))
#> Requesting url: https://api.openalex.org/works/W1516819724
#> Collecting all documents citing the target papers...
#> Requesting url: https://api.openalex.org/works?filter=cites%3AW1516819724
#> Getting 1 page of results with a total of 5 records...
#> Collecting all documents cited by the target papers...
#> Requesting url: https://api.openalex.org/works?filter=cited_by%3AW1516819724
#> Getting 1 page of results with a total of 3 records...
to_biblio <- oa2bibliometrix(flat_snow)

sort(names(to_biblio))
#>  [1] "AB"                "AU"                "AU_CO"            
#>  [4] "AU_UN"             "author"            "backward_count"   
#>  [7] "C1"                "cited_by"          "cited_by_api_url" 
#> [10] "citing"            "concepts"          "connection"       
#> [13] "connection_count"  "counts_by_year"    "CR"               
#> [16] "DB"                "doi"               "DT"               
#> [19] "first_page"        "forward_count"     "host_organization"
#> [22] "ID"                "id_oa"             "id_url"           
#> [25] "ids"               "is_oa"             "is_paratext"      
#> [28] "is_retracted"      "issn_l"            "issue"            
#> [31] "J9"                "JI"                "last_page"        
#> [34] "license"           "oa_input"          "pdf_url"          
#> [37] "publication_date"  "PY"                "referenced_works" 
#> [40] "related_works"     "RP"                "SO"               
#> [43] "so_id"             "SR"                "SR_FULL"          
#> [46] "TC"                "TI"                "url"              
#> [49] "version"           "volume"

Created on 2023-07-15 with reprex v2.0.2

biblioshiny

@trangdata
Copy link
Collaborator Author

CC @yjunechoe as well in case you have some insight into this format.

@massimoaria
Copy link
Collaborator

Please take a look at this massimoaria/bibliometrix#380

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

2 participants