From 753f25489187a80da5103068cedfb12f1db88797 Mon Sep 17 00:00:00 2001 From: "dependabot[bot]" <49699333+dependabot[bot]@users.noreply.github.com> Date: Wed, 13 Sep 2023 03:08:14 +0000 Subject: [PATCH 1/5] Bump docker/metadata-action from 4 to 5 Bumps [docker/metadata-action](https://github.com/docker/metadata-action) from 4 to 5. - [Release notes](https://github.com/docker/metadata-action/releases) - [Upgrade guide](https://github.com/docker/metadata-action/blob/master/UPGRADE.md) - [Commits](https://github.com/docker/metadata-action/compare/v4...v5) --- updated-dependencies: - dependency-name: docker/metadata-action dependency-type: direct:production update-type: version-update:semver-major ... Signed-off-by: dependabot[bot] --- .github/workflows/ci.yml | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/.github/workflows/ci.yml b/.github/workflows/ci.yml index d74fd51..6aa1fa8 100644 --- a/.github/workflows/ci.yml +++ b/.github/workflows/ci.yml @@ -53,7 +53,7 @@ jobs: - name: Docker meta id: meta - uses: docker/metadata-action@v4 + uses: docker/metadata-action@v5 with: images: ghcr.io/${{ github.repository }} flavor: | From 82c102171c75c8854b0931dfe3d41fa0385fd2e1 Mon Sep 17 00:00:00 2001 From: "dependabot[bot]" <49699333+dependabot[bot]@users.noreply.github.com> Date: Wed, 13 Sep 2023 03:08:17 +0000 Subject: [PATCH 2/5] Bump docker/login-action from 2 to 3 Bumps [docker/login-action](https://github.com/docker/login-action) from 2 to 3. - [Release notes](https://github.com/docker/login-action/releases) - [Commits](https://github.com/docker/login-action/compare/v2...v3) --- updated-dependencies: - dependency-name: docker/login-action dependency-type: direct:production update-type: version-update:semver-major ... Signed-off-by: dependabot[bot] --- .github/workflows/ci.yml | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/.github/workflows/ci.yml b/.github/workflows/ci.yml index d74fd51..cfd78db 100644 --- a/.github/workflows/ci.yml +++ b/.github/workflows/ci.yml @@ -65,7 +65,7 @@ jobs: type=ref,priority=700,event=pr - name: Login to GitHub Container Registry - uses: docker/login-action@v2 + uses: docker/login-action@v3 with: registry: ghcr.io username: ${{ github.repository_owner }} From 92534581f3d8c9ce1c06a09f49ffc6d3450cc9c2 Mon Sep 17 00:00:00 2001 From: "dependabot[bot]" <49699333+dependabot[bot]@users.noreply.github.com> Date: Wed, 13 Sep 2023 03:08:20 +0000 Subject: [PATCH 3/5] Bump docker/setup-buildx-action from 2 to 3 Bumps [docker/setup-buildx-action](https://github.com/docker/setup-buildx-action) from 2 to 3. - [Release notes](https://github.com/docker/setup-buildx-action/releases) - [Commits](https://github.com/docker/setup-buildx-action/compare/v2...v3) --- updated-dependencies: - dependency-name: docker/setup-buildx-action dependency-type: direct:production update-type: version-update:semver-major ... Signed-off-by: dependabot[bot] --- .github/workflows/ci.yml | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/.github/workflows/ci.yml b/.github/workflows/ci.yml index d74fd51..a391ae2 100644 --- a/.github/workflows/ci.yml +++ b/.github/workflows/ci.yml @@ -72,7 +72,7 @@ jobs: password: ${{ secrets.GITHUB_TOKEN }} - name: Set up Docker Buildx - uses: docker/setup-buildx-action@v2 + uses: docker/setup-buildx-action@v3 - name: Build Docker image and push to registries uses: docker/build-push-action@v4 From a5968adc4a7a9cdf4b6a9a585d549bd42080a81a Mon Sep 17 00:00:00 2001 From: "dependabot[bot]" <49699333+dependabot[bot]@users.noreply.github.com> Date: Wed, 13 Sep 2023 03:08:24 +0000 Subject: [PATCH 4/5] Bump docker/build-push-action from 4 to 5 Bumps [docker/build-push-action](https://github.com/docker/build-push-action) from 4 to 5. - [Release notes](https://github.com/docker/build-push-action/releases) - [Commits](https://github.com/docker/build-push-action/compare/v4...v5) --- updated-dependencies: - dependency-name: docker/build-push-action dependency-type: direct:production update-type: version-update:semver-major ... Signed-off-by: dependabot[bot] --- .github/workflows/ci.yml | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/.github/workflows/ci.yml b/.github/workflows/ci.yml index d74fd51..1dde1e9 100644 --- a/.github/workflows/ci.yml +++ b/.github/workflows/ci.yml @@ -75,7 +75,7 @@ jobs: uses: docker/setup-buildx-action@v2 - name: Build Docker image and push to registries - uses: docker/build-push-action@v4 + uses: docker/build-push-action@v5 with: context: ${{ github.workspace }} push: ${{ github.event_name != 'pull_request' }} From c322289763128a516cadf1f30c520654fc3d6bf6 Mon Sep 17 00:00:00 2001 From: Roberto Rossini <71787608+robomics@users.noreply.github.com> Date: Thu, 30 May 2024 12:58:39 +0200 Subject: [PATCH 5/5] Bump Nextflow version --- .github/workflows/ci.yml | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/.github/workflows/ci.yml b/.github/workflows/ci.yml index 688109c..a64da46 100644 --- a/.github/workflows/ci.yml +++ b/.github/workflows/ci.yml @@ -151,7 +151,7 @@ jobs: strategy: matrix: - NXF_VER: [ "20.07", "latest-stable" ] + NXF_VER: [ "22.10.8", "latest-stable" ] steps: - name: Checkout repo