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Separate from #32; if I give the config then I get this error:
refgenieserver -c $REFGENIE archive
email-validator not installed, email fields will be treated as str.
To install, run: pip install email-validator
Traceback (most recent call last):
File "/home/nsheff/miniconda3/lib/python3.7/site-packages/attmap/pathex_attmap.py", line 31, in __getattr__
v = super(PathExAttMap, self).__getattribute__(item)
AttributeError: 'YacAttMap' object has no attribute 'set_default'
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "/home/nsheff/miniconda3/lib/python3.7/site-packages/attmap/ordattmap.py", line 45, in __getitem__
return super(OrdAttMap, self).__getitem__(item)
KeyError: 'set_default'
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "/home/nsheff/miniconda3/lib/python3.7/site-packages/attmap/pathex_attmap.py", line 34, in __getattr__
return self.__getitem__(item, expand)
File "/home/nsheff/miniconda3/lib/python3.7/site-packages/attmap/pathex_attmap.py", line 51, in __getitem__
v = super(PathExAttMap, self).__getitem__(item)
File "/home/nsheff/miniconda3/lib/python3.7/site-packages/attmap/ordattmap.py", line 47, in __getitem__
return AttMap.__getitem__(self, item)
File "/home/nsheff/miniconda3/lib/python3.7/site-packages/attmap/attmap.py", line 32, in __getitem__
return self.__dict__[item]
KeyError: 'set_default'
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "/home/nsheff/.local/bin/refgenieserver", line 10, in <module>
sys.exit(main())
File "/home/nsheff/.local/lib/python3.7/site-packages/refgenieserver/main.py", line 124, in main
archive(rgc, args)
File "/home/nsheff/.local/lib/python3.7/site-packages/refgenieserver/server_builder.py", line 52, in archive
asset_desc = rgc[CFG_GENOMES_KEY][genome][CFG_ASSETS_KEY][asset_name].set_default(CFG_ASSET_DESC_KEY, "NA")
File "/home/nsheff/miniconda3/lib/python3.7/site-packages/attmap/pathex_attmap.py", line 38, in __getattr__
raise AttributeError(item)
AttributeError: set_default
The text was updated successfully, but these errors were encountered:
Separate from #32; if I give the config then I get this error:
The text was updated successfully, but these errors were encountered: