inference.py

"""
Open-Domain Question Answering 을 수행하는 inference 코드 입니다.

대부분의 로직은 train.py 와 비슷하나 retrieval, predict 부분이 추가되어 있습니다.
"""


import logging
import sys
from typing import Callable, List, Dict, NoReturn, Tuple

import numpy as np
import pandas as pd

from datasets import (
    load_metric,
    load_from_disk,
    Sequence,
    Value,
    Features,
    Dataset,
    DatasetDict,
)

from transformers import AutoConfig, AutoModelForQuestionAnswering, AutoTokenizer

from transformers import (
    DataCollatorWithPadding,
    EvalPrediction,
    HfArgumentParser,
    TrainingArguments,
    set_seed,
)

from utils_qa import postprocess_qa_predictions_inf, check_no_error
from trainer_qa import QuestionAnsweringTrainer
#from elastic_retrieval import SparseRetrieval

from arguments import (
    ModelArguments,
    DataTrainingArguments,
)


logger = logging.getLogger(__name__)


def main():
    # 가능한 arguments 들은 ./arguments.py 나 transformer package 안의 src/transformers/training_args.py 에서 확인 가능합니다.
    # --help flag 를 실행시켜서 확인할 수 도 있습니다.

    parser = HfArgumentParser(
        (ModelArguments, DataTrainingArguments, TrainingArguments)
    )
    model_args, data_args, training_args = parser.parse_args_into_dataclasses()

    training_args.do_train = True

    print(f"model is from {model_args.model_name_or_path}")
    print(f"data is from {data_args.dataset_name}")

    # logging 설정
    logging.basicConfig(
        format="%(asctime)s - %(levelname)s - %(name)s -   %(message)s",
        datefmt="%m/%d/%Y %H:%M:%S",
        handlers=[logging.StreamHandler(sys.stdout)],
    )

    # verbosity 설정 : Transformers logger의 정보로 사용합니다 (on main process only)
    logger.info("Training/evaluation parameters %s", training_args)

    # 모델을 초기화하기 전에 난수를 고정합니다.
    set_seed(training_args.seed)

    datasets = load_from_disk(data_args.dataset_name)
    print(datasets)

    # AutoConfig를 이용하여 pretrained model 과 tokenizer를 불러옵니다.
    # argument로 원하는 모델 이름을 설정하면 옵션을 바꿀 수 있습니다.
    config = AutoConfig.from_pretrained(
        model_args.config_name
        if model_args.config_name
        else model_args.model_name_or_path,
    )
    tokenizer = AutoTokenizer.from_pretrained(
        model_args.tokenizer_name
        if model_args.tokenizer_name
        else model_args.model_name_or_path,
        use_fast=True,
    )
    model = AutoModelForQuestionAnswering.from_pretrained(
        model_args.model_name_or_path,
        from_tf=bool(".ckpt" in model_args.model_name_or_path),
        config=config,
    )

    # True일 경우 : run passage retrieval
    if data_args.eval_retrieval:
        datasets = run_sparse_retrieval(
            tokenizer.tokenize,
            datasets,
            training_args,
            data_args,
        )

    # eval or predict mrc model
    if training_args.do_eval or training_args.do_predict:
        run_mrc(data_args, training_args, model_args, datasets, tokenizer, model)


def run_sparse_retrieval(
    tokenize_fn: Callable[[str], List[str]],
    datasets: DatasetDict,
    training_args: TrainingArguments,
    data_args: DataTrainingArguments,
    data_path: str = "../data",
    context_path: str = "wikipedia_documents.json",
) -> DatasetDict:

    # Query에 맞는 Passage들을 Retrieval 합니다.
    ##retrieval = SparseRetrieval()

    # df = retrieval.retrieve_ES(
    #     datasets["validation"],
    #     topk=data_args.top_k_retrieval,
    #     ner_path="./inference_tagged.csv",
    # )

    # dataframe을 불러옵니다
    df = pd.read_csv('./abc.csv')
    #df['context'] = df['context'].apply(eval)
    for i in range(len(df)):
        df['context'][i] = [df['context'][i][2:-2]]
    print(df['context'][0])
    print(type(df['context'][0]))
    print(df['question'][0])
    print('---------------------')
    

    # df.to_csv('check.csv')
    # test data 에 대해선 정답이 없으므로 id question context 로만 데이터셋이 구성됩니다.
    if training_args.do_predict:
        f = Features(
            {
                "context": Sequence(feature=Value(dtype="string", id=None)),  # 바꿈!
                "id": Value(dtype="string", id=None),
                "question": Value(dtype="string", id=None),
            }
        )

    # train data 에 대해선 정답이 존재하므로 id question context answer 로 데이터셋이 구성됩니다.
    elif training_args.do_eval:
        f = Features(
            {
                "answers": Sequence(
                    feature={
                        "text": Value(dtype="string", id=None),
                        "answer_start": Value(dtype="int32", id=None),
                    },
                    length=-1,
                    id=None,
                ),
                "context": Sequence(feature=Value(dtype="string", id=None)),  # 바꿈!
                "id": Value(dtype="string", id=None),
                "question": Value(dtype="string", id=None),
            }
        )
    datasets = DatasetDict({"validation": Dataset.from_pandas(df, features=f)})
    return datasets


def run_mrc(
    data_args: DataTrainingArguments,
    training_args: TrainingArguments,
    model_args: ModelArguments,
    datasets: DatasetDict,
    tokenizer,
    model,
) -> NoReturn:

    # eval 혹은 prediction에서만 사용함
    column_names = datasets["validation"].column_names

    question_column_name = "question" if "question" in column_names else column_names[0]
    context_column_name = "context" if "context" in column_names else column_names[1]
    answer_column_name = "answers" if "answers" in column_names else column_names[2]

    # Padding에 대한 옵션을 설정합니다.
    # (question|context) 혹은 (context|question)로 세팅 가능합니다.
    pad_on_right = tokenizer.padding_side == "right"

    # 오류가 있는지 확인합니다.
    last_checkpoint, max_seq_length = check_no_error(
        data_args, training_args, datasets, tokenizer
    )
    # 싹 바꿈!
    def prepare_validation_features(examples):
        test_query = examples["question"]
        test_contexts = examples["context"]
        test_id = examples["id"]
        #topk = len(test_contexts[0])
        print('-----------------------------------------')
        topk = 1
        assert topk == data_args.top_k_retrieval, "topk not correct"
        tq_final = []
        tc_final = []
        ti_final = []
        for i in range(len(test_query)):
            temp_q = [test_query[i] for _ in range(topk)]
            temp_i = [test_id[i] for _ in range(topk)]
            tq_final.extend(temp_q)
            ti_final.extend(temp_i)
            #a = ''.join(test_contexts[i])
            #a = a[2:-2]
            #tc_final.append(a)
            tc_final.extend(test_contexts[i])
        print(len(tq_final))
        print(len(ti_final))
        print(len(tc_final))
        assert len(tq_final) == len(ti_final) and len(tq_final) == len(
            tc_final
        ), "final list length not correct"
        tokenized_examples = tokenizer(
            tq_final if pad_on_right else tc_final,
            tc_final if pad_on_right else tq_final,
            truncation="only_second" if pad_on_right else "only_first",
            max_length=max_seq_length,
            stride=data_args.doc_stride,
            return_overflowing_tokens=True,
            return_offsets_mapping=True,
            return_token_type_ids=False,  # roberta모델을 사용할 경우 False, bert를 사용할 경우 True로 표기해야합니다.
            padding="max_length" if data_args.pad_to_max_length else False,
        )
        sample_mapping = tokenized_examples["overflow_to_sample_mapping"]
        tokenized_examples["example_id"] = []
        for i in range(len(tokenized_examples["input_ids"])):
            sequence_ids = tokenized_examples.sequence_ids(i)
            context_index = 1 if pad_on_right else 0
            sample_index = sample_mapping[i]
            tokenized_examples["example_id"].append(ti_final[sample_index])

            tokenized_examples["offset_mapping"][i] = [
                (o if sequence_ids[k] == context_index else None)
                for k, o in enumerate(tokenized_examples["offset_mapping"][i])
            ]
        return tokenized_examples

    eval_dataset = datasets["validation"]

    # Validation Feature 생성
    eval_dataset = eval_dataset.map(
        prepare_validation_features,
        batched=True,
        num_proc=data_args.preprocessing_num_workers,
        remove_columns=column_names,
        load_from_cache_file=not data_args.overwrite_cache,
    )

    # Data collator
    # flag가 True이면 이미 max length로 padding된 상태입니다.
    # 그렇지 않다면 data collator에서 padding을 진행해야합니다.
    data_collator = DataCollatorWithPadding(
        tokenizer, pad_to_multiple_of=8 if training_args.fp16 else None
    )

    # Post-processing:
    def post_processing_function(
        examples,
        features,
        predictions: Tuple[np.ndarray, np.ndarray],
        training_args: TrainingArguments,
    ) -> EvalPrediction:
        # Post-processing: start logits과 end logits을 original context의 정답과 match시킵니다.
        # 바꿈!
        predictions = postprocess_qa_predictions_inf(
            examples=examples,
            features=features,
            predictions=predictions,
            topk=data_args.top_k_retrieval,
            max_answer_length=data_args.max_answer_length,
            output_dir=training_args.output_dir,
        )
        # Metric을 구할 수 있도록 Format을 맞춰줍니다.
        formatted_predictions = [
            {"id": k, "prediction_text": v} for k, v in predictions.items()
        ]

        if training_args.do_predict:
            return formatted_predictions
        elif training_args.do_eval:
            references = [
                {"id": ex["id"], "answers": ex[answer_column_name]}
                for ex in datasets["validation"]
            ]

            return EvalPrediction(
                predictions=formatted_predictions, label_ids=references
            )

    metric = load_metric("squad")

    def compute_metrics(p: EvalPrediction) -> Dict:
        return metric.compute(predictions=p.predictions, references=p.label_ids)

    print("init trainer...")
    # Trainer 초기화
    trainer = QuestionAnsweringTrainer(
        model=model,
        args=training_args,
        train_dataset=None,
        eval_dataset=eval_dataset,
        eval_examples=datasets["validation"],
        tokenizer=tokenizer,
        data_collator=data_collator,
        post_process_function=post_processing_function,
        compute_metrics=compute_metrics,
    )

    logger.info("*** Evaluate ***")

    #### eval dataset & eval example - predictions.json 생성됨
    if training_args.do_predict:
        predictions = trainer.predict(
            test_dataset=eval_dataset, test_examples=datasets["validation"]
        )

        # predictions.json 은 postprocess_qa_predictions() 호출시 이미 저장됩니다.
        print(
            "No metric can be presented because there is no correct answer given. Job done!"
        )

    if training_args.do_eval:
        metrics = trainer.evaluate()
        metrics["eval_samples"] = len(eval_dataset)

        trainer.log_metrics("test", metrics)
        trainer.save_metrics("test", metrics)


if __name__ == "__main__":
    main()