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Installation issues
majoqubitT10 edited this page Apr 5, 2017
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1 revision
As seen on T10 computer
"updating qcodes" nul
Fetching package metadata ...........
Solving package specifications: .
Package plan for installation in environment C:\Users\root\Anaconda3\envs\qcodes-qdev-master:
The following packages will be UPDATED:
h5py: 2.6.0-np112py35_2 --> 2.7.0-np112py35_0
ipykernel: 4.5.2-py35_0 --> 4.6.0-py35_0
ipython_genutils: 0.1.0-py35_0 --> 0.2.0-py35_0
notebook: 4.4.1-py35_0 --> 5.0.0-py35_0
numpy: 1.12.0-py35_0 --> 1.12.1-py35_0
prompt_toolkit: 1.0.13-py35_0 --> 1.0.14-py35_0
pytz: 2016.10-py35_0 --> 2017.2-py35_0
An unexpected error has occurred.
Please consider posting the following information to the
conda GitHub issue tracker at:
https://github.com/conda/conda/issues
Current conda install:
platform : win-64
conda version : 4.3.13
conda is private : False
conda-env version : 4.3.13
conda-build version : not installed
python version : 3.5.3.final.0
requests version : 2.13.0
root environment : C:\Users\root\Anaconda3 (writable)
default environment : C:\Users\root\Anaconda3\envs\qcodes-qdev-master
envs directories : C:\Users\root\Anaconda3\envs
C:\Users\root\AppData\Local\conda\conda\envs
C:\Users\root\.conda\envs
package cache : C:\Users\root\Anaconda3\pkgs
C:\Users\root\AppData\Local\conda\conda\pkgs
channel URLs : https://repo.continuum.io/pkgs/free/win-64
https://repo.continuum.io/pkgs/free/noarch
https://repo.continuum.io/pkgs/r/win-64
https://repo.continuum.io/pkgs/r/noarch
https://repo.continuum.io/pkgs/pro/win-64
https://repo.continuum.io/pkgs/pro/noarch
https://repo.continuum.io/pkgs/msys2/win-64
https://repo.continuum.io/pkgs/msys2/noarch
config file : None
offline mode : False
user-agent : conda/4.3.13 requests/2.13.0 CPython/3.5.3 Windows/10 Windows/10.0.14393
`$ C:\Users\root\Anaconda3\Scripts\conda-script.py upgrade --all -y`
Traceback (most recent call last):
File "C:\Users\root\Anaconda3\lib\site-packages\conda\exceptions.py", line 591, in conda_exception_handler
return_value = func(*args, **kwargs)
File "C:\Users\root\Anaconda3\lib\site-packages\conda\cli\main.py", line 134, in _main
exit_code = args.func(args, p)
File "C:\Users\root\Anaconda3\lib\site-packages\conda\cli\main_update.py", line 65, in execute
install(args, parser, 'update')
File "C:\Users\root\Anaconda3\lib\site-packages\conda\cli\install.py", line 359, in install
execute_actions(actions, index, verbose=not context.quiet)
File "C:\Users\root\Anaconda3\lib\site-packages\conda\plan.py", line 823, in execute_actions
execute_instructions(plan, index, verbose)
File "C:\Users\root\Anaconda3\lib\site-packages\conda\instructions.py", line 247, in execute_instructions
cmd(state, arg)
File "C:\Users\root\Anaconda3\lib\site-packages\conda\instructions.py", line 107, in UNLINKLINKTRANSACTION_CMD
txn = UnlinkLinkTransaction.create_from_dists(index, prefix, unlink_dists, link_dists)
File "C:\Users\root\Anaconda3\lib\site-packages\conda\core\link.py", line 123, in create_from_dists
for dist, pkg_dir in zip(link_dists, pkg_dirs_to_link))
File "C:\Users\root\Anaconda3\lib\site-packages\conda\core\link.py", line 123, in <genexpr>
for dist, pkg_dir in zip(link_dists, pkg_dirs_to_link))
File "C:\Users\root\Anaconda3\lib\site-packages\conda\gateways\disk\read.py", line 86, in read_package_info
index_json_record = read_index_json(extracted_package_directory)
File "C:\Users\root\Anaconda3\lib\site-packages\conda\gateways\disk\read.py", line 105, in read_index_json
with open(join(extracted_package_directory, 'info', 'index.json')) as fi:
FileNotFoundError: [Errno 2] No such file or directory: 'C:\\Users\\root\\Anaconda3\\pkgs\\h5py-2.7.0-np112py35_0\\info\\index.json'
Collecting https://github.com/qdev-dk/Qcodes/archive/master.zip
Downloading https://github.com/qdev-dk/Qcodes/archive/master.zip (995kB)
100% |################################| 1.0MB 1.3MB/s
Requirement already up-to-date: numpy>=1.10 in c:\users\root\anaconda3\envs\qcodes-qdev-master\lib\site-packages (from qcodes==0.1.3)
Requirement already up-to-date: pyvisa>=1.8 in c:\users\root\anaconda3\envs\qcodes-qdev-master\lib\site-packages (from qcodes==0.1.3)
Requirement already up-to-date: ipython>=4.1.0 in c:\users\root\anaconda3\envs\qcodes-qdev-master\lib\site-packages (from qcodes==0.1.3)
Requirement already up-to-date: jupyter>=1.0.0 in c:\users\root\anaconda3\envs\qcodes-qdev-master\lib\site-packages (from qcodes==0.1.3)
Requirement already up-to-date: h5py>=2.6 in c:\users\root\anaconda3\envs\qcodes-qdev-master\lib\site-packages (from qcodes==0.1.3)
Requirement already up-to-date: websockets>=3.2 in c:\users\root\anaconda3\envs\qcodes-qdev-master\lib\site-packages (from qcodes==0.1.3)
Requirement already up-to-date: jupyter-console in c:\users\root\anaconda3\envs\qcodes-qdev-master\lib\site-packages (from jupyter>=1.0.0->qcodes==0.1.3)
Requirement already up-to-date: ipywidgets in c:\users\root\anaconda3\envs\qcodes-qdev-master\lib\site-packages (from jupyter>=1.0.0->qcodes==0.1.3)
Collecting ipykernel (from jupyter>=1.0.0->qcodes==0.1.3)
Using cached ipykernel-4.6.0-py3-none-any.whl
Collecting notebook (from jupyter>=1.0.0->qcodes==0.1.3)
Using cached notebook-5.0.0-py2.py3-none-any.whl
Requirement already up-to-date: nbconvert in c:\users\root\anaconda3\envs\qcodes-qdev-master\lib\site-packages (from jupyter>=1.0.0->qcodes==0.1.3)
Requirement already up-to-date: qtconsole in c:\users\root\anaconda3\envs\qcodes-qdev-master\lib\site-packages (from jupyter>=1.0.0->qcodes==0.1.3)
Requirement already up-to-date: six in c:\users\root\anaconda3\envs\qcodes-qdev-master\lib\site-packages (from h5py>=2.6->qcodes==0.1.3)
Requirement already up-to-date: pygments in c:\users\root\anaconda3\envs\qcodes-qdev-master\lib\site-packages (from jupyter-console->jupyter>=1.0.0->qcodes==0.1.3)
Requirement already up-to-date: prompt-toolkit<2.0.0,>=1.0.0 in c:\users\root\anaconda3\envs\qcodes-qdev-master\lib\site-packages (from jupyter-console->jupyter>=1.0.0->qcodes==0.1.3)
Requirement already up-to-date: jupyter-client in c:\users\root\anaconda3\envs\qcodes-qdev-master\lib\site-packages (from jupyter-console->jupyter>=1.0.0->qcodes==0.1.3)
Requirement already up-to-date: traitlets>=4.1.0 in c:\users\root\anaconda3\envs\qcodes-qdev-master\lib\site-packages (from ipykernel->jupyter>=1.0.0->qcodes==0.1.3)
Collecting tornado>=4.0 (from ipykernel->jupyter>=1.0.0->qcodes==0.1.3)
Using cached tornado-4.4.3-cp35-cp35m-win_amd64.whl
Requirement already up-to-date: ipython-genutils in c:\users\root\anaconda3\envs\qcodes-qdev-master\lib\site-packages (from notebook->jupyter>=1.0.0->qcodes==0.1.3)
Requirement already up-to-date: jinja2 in c:\users\root\anaconda3\envs\qcodes-qdev-master\lib\site-packages (from notebook->jupyter>=1.0.0->qcodes==0.1.3)
Requirement already up-to-date: jupyter-core in c:\users\root\anaconda3\envs\qcodes-qdev-master\lib\site-packages (from notebook->jupyter>=1.0.0->qcodes==0.1.3)
Requirement already up-to-date: nbformat in c:\users\root\anaconda3\envs\qcodes-qdev-master\lib\site-packages (from notebook->jupyter>=1.0.0->qcodes==0.1.3)
Requirement already up-to-date: mistune!=0.6 in c:\users\root\anaconda3\envs\qcodes-qdev-master\lib\site-packages (from nbconvert->jupyter>=1.0.0->qcodes==0.1.3)
Requirement already up-to-date: entrypoints>=0.2.2 in c:\users\root\anaconda3\envs\qcodes-qdev-master\lib\site-packages (from nbconvert->jupyter>=1.0.0->qcodes==0.1.3)
Requirement already up-to-date: bleach in c:\users\root\anaconda3\envs\qcodes-qdev-master\lib\site-packages (from nbconvert->jupyter>=1.0.0->qcodes==0.1.3)
Requirement already up-to-date: pandocfilters>=1.4.1 in c:\users\root\anaconda3\envs\qcodes-qdev-master\lib\site-packages (from nbconvert->jupyter>=1.0.0->qcodes==0.1.3)
Requirement already up-to-date: testpath in c:\users\root\anaconda3\envs\qcodes-qdev-master\lib\site-packages (from nbconvert->jupyter>=1.0.0->qcodes==0.1.3)
Requirement already up-to-date: wcwidth in c:\users\root\anaconda3\envs\qcodes-qdev-master\lib\site-packages (from prompt-toolkit<2.0.0,>=1.0.0->jupyter-console->jupyter>=1.0.0->qcodes==0.1.3)
Requirement already up-to-date: pyzmq>=13 in c:\users\root\anaconda3\envs\qcodes-qdev-master\lib\site-packages (from jupyter-client->jupyter-console->jupyter>=1.0.0->qcodes==0.1.3)
Requirement already up-to-date: python-dateutil>=2.1 in c:\users\root\anaconda3\envs\qcodes-qdev-master\lib\site-packages (from jupyter-client->jupyter-console->jupyter>=1.0.0->qcodes==0.1.3)
Requirement already up-to-date: MarkupSafe>=0.23 in c:\users\root\anaconda3\envs\qcodes-qdev-master\lib\site-packages (from jinja2->notebook->jupyter>=1.0.0->qcodes==0.1.3)
Requirement already up-to-date: html5lib>=0.99999999 in c:\users\root\anaconda3\envs\qcodes-qdev-master\lib\site-packages (from bleach->nbconvert->jupyter>=1.0.0->qcodes==0.1.3)
Requirement already up-to-date: setuptools>=18.5 in c:\users\root\anaconda3\envs\qcodes-qdev-master\lib\site-packages (from html5lib>=0.99999999->bleach->nbconvert->jupyter>=1.0.0->qcodes==0.1.3)
Requirement already up-to-date: webencodings in c:\users\root\anaconda3\envs\qcodes-qdev-master\lib\site-packages (from html5lib>=0.99999999->bleach->nbconvert->jupyter>=1.0.0->qcodes==0.1.3)
Requirement already up-to-date: appdirs>=1.4.0 in c:\users\root\anaconda3\envs\qcodes-qdev-master\lib\site-packages (from setuptools>=18.5->html5lib>=0.99999999->bleach->nbconvert->jupyter>=1.0.0->qcodes==0.1.3)
Requirement already up-to-date: packaging>=16.8 in c:\users\root\anaconda3\envs\qcodes-qdev-master\lib\site-packages (from setuptools>=18.5->html5lib>=0.99999999->bleach->nbconvert->jupyter>=1.0.0->qcodes==0.1.3)
Requirement already up-to-date: pyparsing in c:\users\root\anaconda3\envs\qcodes-qdev-master\lib\site-packages (from packaging>=16.8->setuptools>=18.5->html5lib>=0.99999999->bleach->nbconvert->jupyter>=1.0.0->qcodes==0.1.3)
Installing collected packages: qcodes, tornado, ipykernel, notebook
Found existing installation: qcodes 0.1.3
Uninstalling qcodes-0.1.3:
Successfully uninstalled qcodes-0.1.3
Running setup.py install for qcodes ... done
Found existing installation: tornado 4.4.2
DEPRECATION: Uninstalling a distutils installed project (tornado) has been deprecated and will be removed in a future version. This is due to the fact that uninstalling a distutils project will only partially uninstall the project.
Uninstalling tornado-4.4.2:
Successfully uninstalled tornado-4.4.2
Rolling back uninstall of tornado
Exception:
Traceback (most recent call last):
File "C:\Users\root\Anaconda3\envs\qcodes-qdev-master\lib\site-packages\pip\basecommand.py", line 215, in main
status = self.run(options, args)
File "C:\Users\root\Anaconda3\envs\qcodes-qdev-master\lib\site-packages\pip\commands\install.py", line 342, in run
prefix=options.prefix_path,
File "C:\Users\root\Anaconda3\envs\qcodes-qdev-master\lib\site-packages\pip\req\req_set.py", line 784, in install
**kwargs
File "C:\Users\root\Anaconda3\envs\qcodes-qdev-master\lib\site-packages\pip\req\req_install.py", line 851, in install
self.move_wheel_files(self.source_dir, root=root, prefix=prefix)
File "C:\Users\root\Anaconda3\envs\qcodes-qdev-master\lib\site-packages\pip\req\req_install.py", line 1064, in move_wheel_files
isolated=self.isolated,
File "C:\Users\root\Anaconda3\envs\qcodes-qdev-master\lib\site-packages\pip\wheel.py", line 345, in move_wheel_files
clobber(source, lib_dir, True)
File "C:\Users\root\Anaconda3\envs\qcodes-qdev-master\lib\site-packages\pip\wheel.py", line 323, in clobber
shutil.copyfile(srcfile, destfile)
File "C:\Users\root\Anaconda3\envs\qcodes-qdev-master\lib\shutil.py", line 121, in copyfile
with open(dst, 'wb') as fdst:
PermissionError: [Errno 13] Permission denied: 'C:\\Users\\root\\Anaconda3\\envs\\qcodes-qdev-master\\Lib\\site-packages\\tornado\\speedups.cp35-win_amd64.pyd'
Press any key to continue . . .
Conda list
(qcodes-qdev-master) C:\Users\root>conda list
# packages in environment at C:\Users\root\Anaconda3\envs\qcodes-qdev-master:
#
appdirs 1.4.3 <pip>
bleach 2.0.0 <pip>
bleach 1.5.0 py35_0
colorama 0.3.7 <pip>
colorama 0.3.7 py35_0
cycler 0.10.0 py35_0
decorator 4.0.11 <pip>
decorator 4.0.11 py35_0
entrypoints 0.2.2 py35_1
h5py 2.6.0 np112py35_2
h5py 2.7.0 <pip>
hdf5 1.8.15.1 vc14_4 [vc14]
html5lib 0.999999999 <pip>
html5lib 0.999 py35_0
icu 57.1 vc14_0 [vc14]
ipykernel 4.5.2 py35_0
ipython 5.3.0 py35_0
ipython-genutils 0.2.0 <pip>
ipython_genutils 0.1.0 py35_0
ipywidgets 6.0.0 py35_0
jinja2 2.9.5 py35_0
Jinja2 2.9.6 <pip>
Jinja2 2.9.5 <pip>
jpeg 9b vc14_0 [vc14]
jsonschema 2.5.1 py35_0
jsonschema 2.6.0 <pip>
jupyter 1.0.0 <pip>
jupyter-client 5.0.1 <pip>
jupyter-console 5.1.0 <pip>
jupyter_client 5.0.0 py35_0
jupyter_core 4.3.0 py35_0
libpng 1.6.27 vc14_0 [vc14]
MarkupSafe 1.0 <pip>
markupsafe 0.23 py35_2
matplotlib 2.0.0 np112py35_0
mistune 0.7.4 <pip>
mistune 0.7.4 py35_0
mkl 2017.0.1 0
nbconvert 5.1.1 py35_0
nbformat 4.3.0 <pip>
nbformat 4.3.0 py35_0
notebook 4.4.1 py35_0
numpy 1.12.1 <pip>
numpy 1.12.0 py35_0
openssl 1.0.2k vc14_0 [vc14]
packaging 16.8 <pip>
pandoc 1.19.2.1 1
pandocfilters 1.4.1 py35_0
path.py 10.1 py35_0
pickleshare 0.7.4 py35_0
pickleshare 0.7.4 <pip>
pip 9.0.1 py35_1
prompt-toolkit 1.0.13 <pip>
prompt-toolkit 1.0.14 <pip>
prompt_toolkit 1.0.13 py35_0
Pygments 2.2.0 <pip>
pygments 2.2.0 py35_0
pyparsing 2.1.4 py35_0
pyparsing 2.2.0 <pip>
pyqt 5.6.0 py35_2
pyqtgraph 0.10.0 <pip>
python 3.5.3 0
python-dateutil 2.6.0 py35_0
pytz 2016.10 py35_0
PyVISA 1.8 <pip>
pyzmq 16.0.2 py35_0
pyzmq 16.0.2 <pip>
qcodes 0.1.3 <pip>
qt 5.6.2 vc14_3 [vc14]
qtconsole 4.3.0 <pip>
qtpy 1.2.1 py35_0
setuptools 34.3.3 <pip>
setuptools 27.2.0 py35_1
simplegeneric 0.8.1 py35_1
simplegeneric 0.8.1 <pip>
sip 4.18 py35_0
six 1.10.0 py35_0
testpath 0.3 py35_0
tk 8.5.18 vc14_0 [vc14]
tornado 4.4.2 <pip>
tornado 4.4.2 py35_0
traitlets 4.3.2 <pip>
traitlets 4.3.2 py35_0
vs2015_runtime 14.0.25123 0
wcwidth 0.1.7 <pip>
wcwidth 0.1.7 py35_0
webencodings 0.5 <pip>
webencodings 0.5 py35_0 conda-forge
websockets 3.3 <pip>
wheel 0.29.0 py35_0
widgetsnbextension 2.0.0 py35_0
widgetsnbextension 2.0.0 <pip>
win-unicode-console 0.5 <pip>
win_unicode_console 0.5 py35_0
ziPython 16.12.42529 <pip>
zlib 1.2.8 vc14_3 [vc14]
(qcodes-qdev-master) C:\Users\root>
pip list
(qcodes-qdev-master) C:\Users\root>pip list
DEPRECATION: The default format will switch to columns in the future. You can use --format=(legacy|columns) (or define a format=(legacy|columns) in your pip.conf under the [list] section) to disable this warning.
appdirs (1.4.3)
bleach (2.0.0)
colorama (0.3.7)
cycler (0.10.0)
decorator (4.0.11)
entrypoints (0.2.2)
h5py (2.7.0)
html5lib (0.999999999)
ipykernel (4.5.2)
ipython (5.3.0)
ipython-genutils (0.2.0)
ipywidgets (6.0.0)
Jinja2 (2.9.6)
jsonschema (2.6.0)
jupyter (1.0.0)
jupyter-client (5.0.1)
jupyter-console (5.1.0)
jupyter-core (4.3.0)
MarkupSafe (1.0)
matplotlib (2.0.0)
mistune (0.7.4)
nbconvert (5.1.1)
nbformat (4.3.0)
notebook (4.4.1)
numpy (1.12.1)
packaging (16.8)
pandocfilters (1.4.1)
path.py (10.1)
pickleshare (0.7.4)
pip (9.0.1)
prompt-toolkit (1.0.14)
Pygments (2.2.0)
pyparsing (2.2.0)
pyqtgraph (0.10.0)
python-dateutil (2.6.0)
pytz (2016.10)
PyVISA (1.8)
pyzmq (16.0.2)
qcodes (0.1.3)
qtconsole (4.3.0)
QtPy (1.2.1)
setuptools (34.3.3)
simplegeneric (0.8.1)
six (1.10.0)
testpath (0.3)
tornado (4.4.2)
traitlets (4.3.2)
wcwidth (0.1.7)
webencodings (0.5)
websockets (3.3)
wheel (0.29.0)
widgetsnbextension (2.0.0)
win-unicode-console (0.5)
ziPython (16.12.42529)