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QC for SinglePopSMCpp_1W22 (Papio_anubis) #1254

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saurabhbelsare opened this issue May 16, 2022 · 1 comment
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QC for SinglePopSMCpp_1W22 (Papio_anubis) #1254

saurabhbelsare opened this issue May 16, 2022 · 1 comment
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Model QC Quality control process for model addition

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@saurabhbelsare
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saurabhbelsare commented May 16, 2022

PR for new model: #1216
Original paper: https://doi.org/10.1093/gbe/evac040
Parameter values: Section "LD-based Recombination Estimates" in methods of above paper has the description of the inference procedure. I obtained the file containing the actual parameters from the authors directly. Sharing with @chriscrsmith who is doing the QC directly.
Population indices: There is only one population

Potential issues that might lead to differences between the model implementations:

QC'er requests:

@saurabhbelsare saurabhbelsare added the Model QC Quality control process for model addition label May 16, 2022
@petrelharp
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Closed in #1261

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